Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU4-22P-201ENST00000411058 166 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 UQCRHP1-204ENST00000424609 274 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 RPL7P34-201ENST00000433316 712 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.09□□□□□ -1.11
ERCC3P19447 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 HSFY3P-201ENST00000444242 1191 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC239798.3-201ENST00000454459 408 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC099670.1-201ENST00000455141 783 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 RPL7P45-201ENST00000455851 743 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC026336.1-201ENST00000466577 351 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AL157777.1-201ENST00000468100 304 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 RN7SL70P-201ENST00000478322 302 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC8.09□□□□□ -1.11
ERCC3P19447 RN7SKP183-201ENST00000517169 324 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AP005902.2-201ENST00000518393 307 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC116917.1-201ENST00000520558 305 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 HMGB1P1-201ENST00000522557 636 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC109635.6-201ENST00000525487 1113 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.09□□□□□ -1.11
ERCC3P19447 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC026458.1-201ENST00000564330 438 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 VN1R78P-201ENST00000597393 564 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.09□□□□□ -1.11
ERCC3P19447 AP002906.1-201ENST00000603405 233 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC063962.1-201ENST00000608199 521 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC092954.1-201ENST00000609121 445 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC093783.1-201ENST00000612976 329 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC096708.4-201ENST00000620563 552 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AP003485.2-201ENST00000623636 610 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC090897.3-201ENST00000636973 1157 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AC011471.4-201ENST00000638271 216 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 AC034111.1-201ENST00000562143 3770 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 AC027279.4-201ENST00000624371 2072 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
ERCC3P19447 BRAFP1-201ENST00000445336 2703 ntBASIC8.09□□□□□ -1.12
ERCC3P19447 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 CDY19P-201ENST00000411668 1613 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 CDY18P-201ENST00000438294 1609 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 RNU6-224P-201ENST00000384055 107 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
ERCC3P19447 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 AC026310.1-201ENST00000396004 378 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 KRR1P1-201ENST00000419430 803 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC246680.2-201ENST00000422106 389 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AHCYP8-201ENST00000425108 209 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 NAP1L4P2-201ENST00000425958 899 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 AC097499.1-201ENST00000444277 208 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.08□□□□□ -1.12
ERCC3P19447 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.08□□□□□ -1.12
ERCC3P19447 RN7SL393P-201ENST00000463588 296 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 RN7SL797P-201ENST00000486314 297 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 RPL5P23-201ENST00000496040 868 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC082651.2-201ENST00000496833 166 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC8.08□□□□□ -1.12
ERCC3P19447 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 AC008837.1-201ENST00000511513 412 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.08□□□□□ -1.12
ERCC3P19447 BCAS2P1-201ENST00000528022 632 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms