Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NACAP7-201ENST00000407371 609 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 RNA5SP431-201ENST00000410312 120 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
PDGFRAP16234 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.46□□□□□ -1.38
PDGFRAP16234 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 AP002453.1-201ENST00000492327 668 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFRAP16234 AC090958.1-201ENST00000511122 351 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AC011416.1-201ENST00000514947 1732 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFRAP16234 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFRAP16234 AC090651.1-201ENST00000567865 634 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 RNU4ATAC-201ENST00000580972 127 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 GLYATL1P2-202ENST00000588046 902 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AC020916.2-201ENST00000591242 360 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AP001542.1-201ENST00000591314 200 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AP001823.1-201ENST00000604056 1003 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AC008555.7-201ENST00000605008 583 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 AC073488.6-201ENST00000632293 754 ntBASIC6.46□□□□□ -1.38
PDGFRAP16234 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFRAP16234 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFRAP16234 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFRAP16234 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PDGFRAP16234 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PDGFRAP16234 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFRAP16234 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PDGFRAP16234 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 ZNF402P-201ENST00000404435 3100 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PDGFRAP16234 MIR621-201ENST00000384919 96 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFRAP16234 MTND4LP17-201ENST00000414607 293 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.45□□□□□ -1.38
PDGFRAP16234 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 IGLV3-4-201ENST00000432300 244 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFRAP16234 OR3D1P-201ENST00000438288 955 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 RPSAP40-201ENST00000442343 891 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 AL590004.3-202ENST00000445883 451 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 HMGB1P7-201ENST00000450921 612 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 RPL5P16-201ENST00000471467 790 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 RPS26P24-201ENST00000497656 331 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFRAP16234 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.45□□□□□ -1.38
PDGFRAP16234 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFRAP16234 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 AL845552.1-201ENST00000556820 323 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 AC027334.1-201ENST00000603257 310 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 MIPEPP2-201ENST00000422560 1819 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFRAP16234 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 HSPD1P8-201ENST00000400121 1658 ntBASIC6.45□□□□□ -1.38
PDGFRAP16234 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
PDGFRAP16234 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFRAP16234 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFRAP16234 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFRAP16234 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PDGFRAP16234 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PDGFRAP16234 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFRAP16234 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PDGFRAP16234 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PDGFRAP16234 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFRAP16234 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFRAP16234 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFRAP16234 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
PDGFRAP16234 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFRAP16234 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.44□□□□□ -1.38
PDGFRAP16234 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PDGFRAP16234 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PDGFRAP16234 RAB5CP1-201ENST00000395972 580 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms