Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC018645.2-201ENST00000609151 472 ntBASIC5.72□□□□□ -1.49
HLA-DQA2P01906 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.72□□□□□ -1.49
HLA-DQA2P01906 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQA2P01906 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.71□□□□□ -1.49
HLA-DQA2P01906 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.71□□□□□ -1.49
HLA-DQA2P01906 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQA2P01906 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.71□□□□□ -1.49
HLA-DQA2P01906 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQA2P01906 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL669831.5-218ENST00000591702 1873 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC011815.2-201ENST00000618230 2021 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 PPIAP24-201ENST00000328558 471 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 MRPL32P1-201ENST00000406301 247 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 RNA5SP115-201ENST00000411160 107 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC069282.1-201ENST00000411911 526 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 CDY17P-201ENST00000414121 1282 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC092646.1-201ENST00000427142 901 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 CDY8P-201ENST00000428380 1279 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL845321.1-201ENST00000444603 348 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 SUMO2P1-206ENST00000445436 284 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 CDY20P-201ENST00000447528 1279 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL121578.2-201ENST00000448797 447 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC009244.1-201ENST00000450566 258 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 FCF1P6-201ENST00000456841 595 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 EIF3LP2-201ENST00000457262 807 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 SCARNA5-201ENST00000516201 276 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 SCARNA11.1-201ENST00000516918 132 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC092718.4-201ENST00000566639 716 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 RN7SL657P-201ENST00000582431 293 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC005242.1-201ENST00000585658 438 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AL137000.1-201ENST00000610528 1244 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC015922.4-201ENST00000612568 690 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC025016.1-201ENST00000616746 682 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC007671.1-201ENST00000616957 830 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC010872.1-201ENST00000624225 675 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 MAPK10-350ENST00000641777 965 ntBASIC5.71□□□□□ -1.5
HLA-DQA2P01906 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQA2P01906 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 OR4K17-201ENST00000315543 1032 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 OR11H13P-201ENST00000359695 979 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 AC019178.1-201ENST00000392337 440 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 AC007068.1-201ENST00000396690 844 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 U3.43-201ENST00000410734 213 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 AL589794.1-201ENST00000424971 390 ntBASIC5.7□□□□□ -1.5
HLA-DQA2P01906 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQA2P01906 GAPDHP75-201ENST00000433910 943 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms