Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC103563.5-201ENST00000455643 364 ntBASIC5.94□□□□□ -1.46
TNFP01375 AL122020.1-201ENST00000472287 459 ntBASIC5.94□□□□□ -1.46
TNFP01375 PSMA2P2-201ENST00000504319 686 ntBASIC5.94□□□□□ -1.46
TNFP01375 SNORD46.2-201ENST00000516021 102 ntBASIC5.94□□□□□ -1.46
TNFP01375 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 MIR4776-2-201ENST00000580204 80 ntBASIC5.94□□□□□ -1.46
TNFP01375 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.94□□□□□ -1.46
TNFP01375 AL357153.4-201ENST00000620487 1016 ntBASIC5.94□□□□□ -1.46
TNFP01375 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.94□□□□□ -1.46
TNFP01375 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TNFP01375 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TNFP01375 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TNFP01375 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TNFP01375 AC092724.1-201ENST00000624623 3397 ntBASIC5.93□□□□□ -1.46
TNFP01375 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.93□□□□□ -1.46
TNFP01375 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.93□□□□□ -1.46
TNFP01375 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 AC091305.2-201ENST00000624049 1576 ntBASIC5.93□□□□□ -1.46
TNFP01375 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 OR52B3P-201ENST00000314715 928 ntBASIC5.93□□□□□ -1.46
TNFP01375 AL031985.1-201ENST00000392713 418 ntBASIC5.93□□□□□ -1.46
TNFP01375 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 AL096711.1-201ENST00000404780 554 ntBASIC5.93□□□□□ -1.46
TNFP01375 MIR1203-201ENST00000408812 85 ntBASIC5.93□□□□□ -1.46
TNFP01375 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 BX284632.2-201ENST00000421091 399 ntBASIC5.93□□□□□ -1.46
TNFP01375 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.93□□□□□ -1.46
TNFP01375 AL512605.1-202ENST00000441919 381 ntBASIC5.93□□□□□ -1.46
TNFP01375 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 AL512593.1-201ENST00000444758 779 ntBASIC5.93□□□□□ -1.46
TNFP01375 AL359955.2-201ENST00000445380 353 ntBASIC5.93□□□□□ -1.46
TNFP01375 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 RPS27AP3-201ENST00000453803 454 ntBASIC5.93□□□□□ -1.46
TNFP01375 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.93□□□□□ -1.46
TNFP01375 SETP20-201ENST00000457046 852 ntBASIC5.93□□□□□ -1.46
TNFP01375 AC007998.1-201ENST00000474156 672 ntBASIC5.93□□□□□ -1.46
TNFP01375 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.93□□□□□ -1.46
TNFP01375 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.93□□□□□ -1.46
TNFP01375 MTATP6P1-201ENST00000514057 681 ntBASIC5.93□□□□□ -1.46
TNFP01375 AC022826.1-201ENST00000519383 805 ntBASIC5.93□□□□□ -1.46
TNFP01375 IGKV3D-34-201ENST00000522638 302 ntBASIC5.93□□□□□ -1.46
TNFP01375 AC110056.1-201ENST00000525759 911 ntBASIC5.93□□□□□ -1.46
TNFP01375 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 PCNAP4-201ENST00000532690 730 ntBASIC5.93□□□□□ -1.46
TNFP01375 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.93□□□□□ -1.46
TNFP01375 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.93□□□□□ -1.46
TNFP01375 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 AC079414.3-201ENST00000612986 1090 ntBASIC5.93□□□□□ -1.46
TNFP01375 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.93□□□□□ -1.46
TNFP01375 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.93□□□□□ -1.46
TNFP01375 AC079753.1-201ENST00000623243 3868 ntBASIC5.93□□□□□ -1.46
TNFP01375 AC020656.2-201ENST00000613291 5309 ntBASIC5.93□□□□□ -1.46
TNFP01375 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.93□□□□□ -1.46
TNFP01375 KARSP1-201ENST00000451871 1752 ntBASIC5.93□□□□□ -1.46
TNFP01375 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TNFP01375 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 PABPC1P8-201ENST00000452851 2086 ntBASIC5.92□□□□□ -1.46
TNFP01375 AOX3P-204ENST00000491025 2107 ntBASIC5.92□□□□□ -1.46
TNFP01375 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 AC027088.4-201ENST00000611559 1947 ntBASIC5.92□□□□□ -1.46
TNFP01375 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.92□□□□□ -1.46
TNFP01375 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.92□□□□□ -1.46
TNFP01375 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TNFP01375 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.92□□□□□ -1.46
TNFP01375 OR10R3P-201ENST00000361688 942 ntBASIC5.92□□□□□ -1.46
TNFP01375 SNORD8-201ENST00000363915 110 ntBASIC5.92□□□□□ -1.46
TNFP01375 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms