Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC005899.6-201ENST00000620729 297 ntBASIC5.82□□□□□ -1.48
CLPTM1O96005 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
CLPTM1O96005 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.82□□□□□ -1.48
CLPTM1O96005 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.82□□□□□ -1.48
CLPTM1O96005 AC003992.1-201ENST00000635364 557 ntBASIC5.82□□□□□ -1.48
CLPTM1O96005 AC073869.7-201ENST00000640874 297 ntBASIC5.82□□□□□ -1.48
CLPTM1O96005 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLPTM1O96005 LINC02019-201ENST00000608605 2060 ntBASIC5.82□□□□□ -1.48
CLPTM1O96005 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLPTM1O96005 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLPTM1O96005 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLPTM1O96005 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLPTM1O96005 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLPTM1O96005 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLPTM1O96005 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CLPTM1O96005 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 MAPK10-338ENST00000641647 3362 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLPTM1O96005 RNA5SP474-201ENST00000391234 90 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 ARSFP1-201ENST00000398758 477 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 AL353133.1-201ENST00000407695 401 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AL731534.1-201ENST00000434711 269 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 E2F6P3-201ENST00000441743 743 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC022080.2-201ENST00000452932 533 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 RN7SL37P-201ENST00000490461 307 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.81□□□□□ -1.48
CLPTM1O96005 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.81□□□□□ -1.48
CLPTM1O96005 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.81□□□□□ -1.48
CLPTM1O96005 RNA5SP400-201ENST00000517155 111 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC027796.1-201ENST00000575593 512 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 MIR132-201ENST00000591554 101 ntBASIC5.81□□□□□ -1.48
CLPTM1O96005 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.81□□□□□ -1.48
CLPTM1O96005 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.81□□□□□ -1.48
CLPTM1O96005 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLPTM1O96005 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLPTM1O96005 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CLPTM1O96005 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 AP005432.1-201ENST00000580891 3485 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.8□□□□□ -1.48
CLPTM1O96005 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 AC074141.1-201ENST00000588129 2995 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC079248.1-201ENST00000427568 1546 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.8□□□□□ -1.48
CLPTM1O96005 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
CLPTM1O96005 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.8□□□□□ -1.48
CLPTM1O96005 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLPTM1O96005 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 RNA5SP187-201ENST00000384400 119 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLPTM1O96005 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.8□□□□□ -1.48
CLPTM1O96005 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.8□□□□□ -1.48
CLPTM1O96005 AP003385.1-201ENST00000426387 893 ntBASIC5.8□□□□□ -1.48
CLPTM1O96005 MTND2P40-201ENST00000436718 841 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms