Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC119674.1-202ENST00000641333 1860 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 RPL11P4-201ENST00000332269 436 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NKX2-2O95096 CXADRP1-201ENST00000398098 1095 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AL034417.1-201ENST00000399343 800 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 SEPT7P8-201ENST00000413308 775 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC007562.1-201ENST00000421819 517 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 SETP10-201ENST00000424368 814 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 MTCO1P51-201ENST00000427672 1060 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC094019.1-201ENST00000434678 472 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AC023274.2-201ENST00000445264 521 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 RAB28P3-201ENST00000448325 597 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC073476.1-201ENST00000452854 407 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 MARK2P8-201ENST00000476069 952 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 RPL37AP8-201ENST00000494116 276 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 ABCA11P-202ENST00000504019 2110 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 OR6M2P-201ENST00000529831 871 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-2O95096 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 NDUFB9P1-201ENST00000604683 510 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AL591167.1-201ENST00000607321 456 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AC015819.1-201ENST00000613588 663 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 CXADRP3-202ENST00000617265 1100 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 AC106730.3-201ENST00000624568 641 ntBASIC5.79□□□□□ -1.48
NKX2-2O95096 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NKX2-2O95096 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-2O95096 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-2O95096 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-2O95096 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 CCNT2P1-201ENST00000423082 1315 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 WBP11P1-201ENST00000562560 1931 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 RN7SKP184-201ENST00000362348 333 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 RNU1-49P-201ENST00000363468 159 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 SNORA43.1-201ENST00000364863 140 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 AL360271.1-201ENST00000395679 510 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AK3P5-201ENST00000432033 519 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 MTND4P15-201ENST00000437913 1033 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 PPIAP10-201ENST00000438675 458 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NKX2-2O95096 RPL31P20-201ENST00000449593 360 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 RARRES2P3-201ENST00000457739 473 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 RWDD4P1-201ENST00000488019 565 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 RNU6-319P-201ENST00000516025 108 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms