Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.04□□□□□ -1.44
SHOX2O60902 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SHOX2O60902 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SHOX2O60902 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SHOX2O60902 MYL6P5-201ENST00000412707 459 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.04□□□□□ -1.44
SHOX2O60902 CRIP1P1-201ENST00000427567 185 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 RPL12P18-201ENST00000437175 325 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 CCNJP1-201ENST00000450600 1149 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 UOX-201ENST00000471089 899 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 AC025271.1-201ENST00000485045 429 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 AC012123.2-201ENST00000485809 248 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.04□□□□□ -1.44
SHOX2O60902 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.04□□□□□ -1.44
SHOX2O60902 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.04□□□□□ -1.44
SHOX2O60902 GAPDHP62-201ENST00000515313 990 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.04□□□□□ -1.44
SHOX2O60902 DIMT1P1-201ENST00000603970 763 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 AL353729.2-201ENST00000605859 1249 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 RN7SL261P-201ENST00000613441 282 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 AC140479.4-205ENST00000636339 820 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHOX2O60902 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 AC011933.2-201ENST00000578539 2790 ntBASIC6.04□□□□□ -1.44
SHOX2O60902 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SHOX2O60902 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.04□□□□□ -1.44
SHOX2O60902 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHOX2O60902 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.03□□□□□ -1.44
SHOX2O60902 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC006484.1-201ENST00000435086 1884 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.03□□□□□ -1.44
SHOX2O60902 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 PPIAP24-201ENST00000328558 471 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 RPS14P4-201ENST00000415880 418 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 OSTCP2-201ENST00000437956 444 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 AL358876.1-201ENST00000453364 1075 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 ACA64.4-201ENST00000459070 127 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 RN7SL649P-201ENST00000496974 275 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC010409.2-201ENST00000505780 478 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC092865.1-201ENST00000544395 1023 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.03□□□□□ -1.44
SHOX2O60902 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC119403.2-201ENST00000590960 598 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AC005332.4-201ENST00000592752 579 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AL513327.3-201ENST00000602618 469 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 AC006363.1-201ENST00000603806 463 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC021766.1-201ENST00000624404 741 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.03□□□□□ -1.44
SHOX2O60902 AC027559.1-201ENST00000636288 271 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 LINC02495-203ENST00000636704 242 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 MRRFP1-201ENST00000435941 1675 ntBASIC6.03□□□□□ -1.44
SHOX2O60902 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SHOX2O60902 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHOX2O60902 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.03□□□□□ -1.44
SHOX2O60902 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHOX2O60902 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.03□□□□□ -1.44
SHOX2O60902 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.02□□□□□ -1.44
SHOX2O60902 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.02□□□□□ -1.45
SHOX2O60902 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 MIR621-201ENST00000384919 96 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 RPL24P2-201ENST00000421023 475 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms