Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SNX3O60493 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX3O60493 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 AL133243.2-201ENST00000610331 1621 ntBASIC5.88□□□□□ -1.47
SNX3O60493 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 SOD1P1-201ENST00000407803 440 ntBASIC5.88□□□□□ -1.47
SNX3O60493 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX3O60493 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX3O60493 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX3O60493 GYG1P2-201ENST00000426437 1006 ntBASIC5.88□□□□□ -1.47
SNX3O60493 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX3O60493 AL603882.1-201ENST00000463059 681 ntBASIC5.88□□□□□ -1.47
SNX3O60493 AC018475.1-201ENST00000478358 465 ntBASIC5.88□□□□□ -1.47
SNX3O60493 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX3O60493 AP001960.1-201ENST00000506494 658 ntBASIC5.88□□□□□ -1.47
SNX3O60493 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX3O60493 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 GAPDHP62-201ENST00000515313 990 ntBASIC5.88□□□□□ -1.47
SNX3O60493 RNA5SP230-201ENST00000517039 122 ntBASIC5.88□□□□□ -1.47
SNX3O60493 RPL3P13-201ENST00000550415 216 ntBASIC5.88□□□□□ -1.47
SNX3O60493 AL359219.2-201ENST00000555184 348 ntBASIC5.88□□□□□ -1.47
SNX3O60493 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 MIR5705-201ENST00000579870 89 ntBASIC5.88□□□□□ -1.47
SNX3O60493 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX3O60493 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX3O60493 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 AC005514.1-201ENST00000623521 208 ntBASIC5.88□□□□□ -1.47
SNX3O60493 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX3O60493 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX3O60493 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
SNX3O60493 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX3O60493 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNX3O60493 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX3O60493 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 AC092376.2-201ENST00000622621 4116 ntBASIC5.87□□□□□ -1.47
SNX3O60493 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 OR7A2P-201ENST00000304105 930 ntBASIC5.87□□□□□ -1.47
SNX3O60493 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX3O60493 RN7SKP30-201ENST00000411373 334 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX3O60493 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 RANP7-201ENST00000418085 644 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 NMD3P2-201ENST00000421815 761 ntBASIC5.87□□□□□ -1.47
SNX3O60493 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 GTF2IP14-201ENST00000441415 586 ntBASIC5.87□□□□□ -1.47
SNX3O60493 RPL6P24-201ENST00000445338 864 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 AC025271.1-201ENST00000485045 429 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AL133372.1-201ENST00000493565 745 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.87□□□□□ -1.47
SNX3O60493 Y_RNA.710-201ENST00000516975 110 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX3O60493 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.87□□□□□ -1.47
SNX3O60493 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX3O60493 PPIAP14-201ENST00000577627 496 ntBASIC5.87□□□□□ -1.47
SNX3O60493 MIR4262-201ENST00000578394 54 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX3O60493 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX3O60493 AC024451.4-201ENST00000602578 752 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 uc_338.26-201ENST00000612659 160 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AL162574.1-201ENST00000615702 950 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC027506.1-201ENST00000621395 198 ntBASIC5.87□□□□□ -1.47
SNX3O60493 AC007347.2-201ENST00000623044 180 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms