Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ZIC3O60481 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.66□□□□□ -1.5
ZIC3O60481 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZIC3O60481 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZIC3O60481 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZIC3O60481 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZIC3O60481 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZIC3O60481 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC011815.2-201ENST00000618230 2021 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ZIC3O60481 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 RNA5SP110-201ENST00000362638 115 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ZIC3O60481 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 MIR433-201ENST00000384837 93 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ZIC3O60481 AL353626.3-201ENST00000413399 657 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 MRPS33P4-201ENST00000434892 317 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC074367.1-201ENST00000438685 1125 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.65□□□□□ -1.5
ZIC3O60481 AL691517.1-201ENST00000440833 1235 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 MTND5P8-201ENST00000449817 1083 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AL353718.1-201ENST00000451028 517 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 RANP2-201ENST00000456833 229 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 RPL37P23-201ENST00000492641 294 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 OR7E99P-201ENST00000505750 922 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC106806.2-201ENST00000509365 500 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.65□□□□□ -1.5
ZIC3O60481 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
ZIC3O60481 MAST4-IT1-201ENST00000514241 658 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZIC3O60481 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 CR383656.14-201ENST00000551951 406 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.65□□□□□ -1.5
ZIC3O60481 MIR4271-201ENST00000582451 67 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.65□□□□□ -1.5
ZIC3O60481 AP005136.2-201ENST00000583253 1049 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.65□□□□□ -1.5
ZIC3O60481 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.65□□□□□ -1.5
ZIC3O60481 AC105148.1-201ENST00000604961 409 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC073111.2-201ENST00000605657 1075 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AL158211.2-201ENST00000607282 395 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC097641.3-201ENST00000613523 464 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC073593.1-201ENST00000624500 411 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AC119674.1-220ENST00000641502 1048 ntBASIC5.65□□□□□ -1.5
ZIC3O60481 AP000641.1-201ENST00000531988 1639 ntBASIC5.65□□□□□ -1.51
ZIC3O60481 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
ZIC3O60481 AC007114.2-201ENST00000576014 4281 ntBASIC5.65□□□□□ -1.51
ZIC3O60481 EIF3EP1-201ENST00000433978 1316 ntBASIC5.65□□□□□ -1.51
ZIC3O60481 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
ZIC3O60481 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.65□□□□□ -1.51
ZIC3O60481 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
ZIC3O60481 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZIC3O60481 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 AC005034.3-201ENST00000604845 1747 ntBASIC5.65□□□□□ -1.51
ZIC3O60481 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.65□□□□□ -1.51
ZIC3O60481 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZIC3O60481 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.65□□□□□ -1.51
ZIC3O60481 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
ZIC3O60481 AL033543.1-201ENST00000623440 13454 ntBASIC5.65□□□□□ -1.51
ZIC3O60481 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZIC3O60481 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZIC3O60481 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.65□□□□□ -1.51
ZIC3O60481 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.65□□□□□ -1.51
ZIC3O60481 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ZIC3O60481 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 AC068446.1-201ENST00000556425 1549 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms