Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SDCBPO00560 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 PSMA6P1-201ENST00000400275 741 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 PTCD2P2-201ENST00000415579 1095 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 WDR95P-201ENST00000425638 1542 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 LDHAP2-201ENST00000437325 985 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AL645936.1-201ENST00000441979 518 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AL356121.1-201ENST00000442911 156 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 AC009963.4-201ENST00000448535 339 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.1□□□□□ -1.59
SDCBPO00560 AL133351.3-201ENST00000454998 193 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC099670.1-201ENST00000455141 783 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.1□□□□□ -1.59
SDCBPO00560 SNX18P24-201ENST00000505249 671 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.1□□□□□ -1.59
SDCBPO00560 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 RNA5SP206-201ENST00000516703 121 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 AP001858.2-201ENST00000536213 601 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 AC024651.2-201ENST00000562480 2098 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 WBP1LP11-201ENST00000586141 328 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.1□□□□□ -1.59
SDCBPO00560 AC012368.3-201ENST00000604190 219 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 AC011891.2-201ENST00000604949 397 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.1□□□□□ -1.59
SDCBPO00560 AL133243.2-201ENST00000610331 1621 ntBASIC5.1□□□□□ -1.59
SDCBPO00560 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.1□□□□□ -1.59
SDCBPO00560 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SDCBPO00560 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SDCBPO00560 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SDCBPO00560 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SDCBPO00560 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 AL049634.1-201ENST00000453770 1720 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 AC089998.1-201ENST00000548575 3141 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.09□□□□□ -1.59
SDCBPO00560 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
SDCBPO00560 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.09□□□□□ -1.59
SDCBPO00560 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SDCBPO00560 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 AL354868.1-201ENST00000417077 482 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 RPS7P8-201ENST00000418311 581 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 RPL7AP14-201ENST00000424041 802 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC013403.1-201ENST00000436954 263 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 KRT8P51-201ENST00000438938 274 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 CUBNP2-201ENST00000443534 1139 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 RPL23AP60-201ENST00000450011 454 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.09□□□□□ -1.59
SDCBPO00560 ACA64.4-201ENST00000459070 127 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AC004890.1-201ENST00000461005 181 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 RPS7P10-201ENST00000464254 603 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 MRPL57P6-201ENST00000506570 309 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 MRPS5P3-201ENST00000515577 166 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 RN7SKP288-201ENST00000516227 268 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SDCBPO00560 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC136777.2-201ENST00000522979 358 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.09□□□□□ -1.59
SDCBPO00560 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.09□□□□□ -1.59
SDCBPO00560 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms