Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC28A1O00337 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 RN7SKP166-201ENST00000410812 305 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 NME1P1-201ENST00000420914 382 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AL355994.1-201ENST00000424379 260 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AC092651.1-201ENST00000426110 312 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 GAPDHP19-201ENST00000431768 1005 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AC094019.1-201ENST00000434678 472 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 RPS3AP38-201ENST00000435889 763 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC28A1O00337 OR3D1P-201ENST00000438288 955 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AL359839.1-201ENST00000451975 1160 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 snoU13.29-201ENST00000459370 104 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AC018639.1-201ENST00000492994 442 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 CCDC11P1-201ENST00000503137 1162 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.87□□□□□ -1.47
SLC28A1O00337 MIR212-201ENST00000586026 110 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AL136097.3-201ENST00000611097 505 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 CASC19-255ENST00000641733 1385 ntBASIC5.87□□□□□ -1.47
SLC28A1O00337 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.87□□□□□ -1.47
SLC28A1O00337 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SLC28A1O00337 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.87□□□□□ -1.47
SLC28A1O00337 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SLC28A1O00337 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 THAP12P9-201ENST00000503971 2360 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC28A1O00337 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 MTND2P12-201ENST00000417560 1252 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 RPS15AP30-201ENST00000420976 390 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AK3P5-201ENST00000432033 519 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 PSMD8P1-201ENST00000436275 769 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AC013403.1-201ENST00000436954 263 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AP002371.1-201ENST00000463604 433 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 TRBV5-2-201ENST00000489095 273 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC093815.1-201ENST00000508637 280 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 NPM1P42-201ENST00000560329 862 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AP001823.1-201ENST00000604056 1003 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AC087468.1-201ENST00000604365 630 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.86□□□□□ -1.47
SLC28A1O00337 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.86□□□□□ -1.47
SLC28A1O00337 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC083837.1-201ENST00000565297 2994 ntBASIC5.86□□□□□ -1.47
SLC28A1O00337 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SLC28A1O00337 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.85□□□□□ -1.47
SLC28A1O00337 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms