Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 RPL6P30-201ENST00000443382 862 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AL133351.3-201ENST00000454998 193 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 RNU6-775P-201ENST00000459318 96 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC068228.1-201ENST00000461723 211 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC094085.1-201ENST00000468914 584 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC068522.1-201ENST00000482895 345 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC090568.1-201ENST00000509499 856 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 KHDC1P1-201ENST00000511053 508 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 IGHV4-55-201ENST00000520889 368 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC005332.4-201ENST00000592752 579 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AP001437.1-201ENST00000608783 456 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 TCL6_3.1-201ENST00000619064 137 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC243960.7-201ENST00000623532 707 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 SAMMSON-210ENST00000641260 1308 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC105749.1-201ENST00000631338 2008 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 U3.43-201ENST00000410734 213 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP108-201ENST00000411367 328 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 CASKP1-201ENST00000412870 582 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC097721.1-201ENST00000427150 1253 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 UBE2V2P3-201ENST00000433562 437 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 PNKDP1-201ENST00000435914 430 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 DNAJA1P5-201ENST00000440278 943 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 OR4D12P-201ENST00000509361 911 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 SNORA81.2-201ENST00000516868 170 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP35-201ENST00000517210 151 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 IGKV2-4-201ENST00000523070 340 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 KCTD9P4-201ENST00000526766 1166 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC036111.2-201ENST00000533247 901 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC009120.3-201ENST00000563335 499 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC090826.1-203ENST00000569235 490 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AP005136.2-201ENST00000583253 1049 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC011497.2-201ENST00000600255 639 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AL583832.1-201ENST00000603227 784 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AL513218.1-201ENST00000606527 391 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AL136984.1-201ENST00000607611 1893 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms