Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 RN7SKP226-201ENST00000364912 300 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 RPL31P1-201ENST00000398116 372 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC008072.1-201ENST00000434254 824 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 OR7H1P-201ENST00000448965 922 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 OR51B8P-201ENST00000449892 769 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 RPL21P134-201ENST00000453468 483 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL358832.1-201ENST00000497800 389 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 HMGN1P13-201ENST00000505795 138 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC068134.3-201ENST00000513620 788 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 PTTG3P-201ENST00000521862 606 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 MTCO3P15-201ENST00000526563 574 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AP002004.1-206ENST00000532441 876 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC125611.2-201ENST00000551907 647 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC121758.1-202ENST00000556917 658 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC012182.1-201ENST00000570133 895 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC090287.1-201ENST00000578374 291 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL785P-201ENST00000578437 253 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 DUXAP4-201ENST00000603046 613 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL161729.3-201ENST00000603533 673 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL161729.2-201ENST00000605700 456 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC000068.3-201ENST00000607934 427 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AP000894.4-201ENST00000610185 483 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC009233.1-201ENST00000616477 371 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC074029.3-201ENST00000618623 312 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC005790.1-201ENST00000619774 450 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 FAM157B-203ENST00000639350 358 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 NXF4-202ENST00000416098 1465 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 HSPD1P7-201ENST00000447985 1686 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 DDX43P1-201ENST00000510713 1763 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC008985.1-201ENST00000624169 2239 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC116158.1-201ENST00000560231 2129 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.78□□□□□ -1.16
CUEDC1Q9NWM3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.16
CUEDC1Q9NWM3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.16
CUEDC1Q9NWM3 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC009135.2-201ENST00000624136 1768 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RNU4-73P-201ENST00000363164 141 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RNU6-560P-201ENST00000364007 108 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RNU6-253P-201ENST00000384730 105 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MIR301B-201ENST00000390813 78 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RPS26P13-201ENST00000419030 330 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RPSAP59-201ENST00000421048 890 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RPS7P12-201ENST00000422385 582 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 TRIM43CP-201ENST00000422468 1028 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms