Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 Z83838.1-202ENST00000456225 839 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC104164.1-201ENST00000460282 590 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 RN7SL269P-201ENST00000467795 305 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC092865.4-201ENST00000477936 615 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AP002884.1-201ENST00000479691 655 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 CYCSP38-201ENST00000559840 322 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 MIR4271-201ENST00000582451 67 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AL136228.1-201ENST00000622221 319 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 IFIT1P1-201ENST00000400497 1449 ntBASIC6.41□□□□□ -1.38
CISHQ9NSE2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.41□□□□□ -1.38
CISHQ9NSE2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CISHQ9NSE2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CISHQ9NSE2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CISHQ9NSE2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC022164.1-201ENST00000568767 2673 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CISHQ9NSE2 RNU2-18P-201ENST00000411224 162 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC069154.1-201ENST00000432914 542 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 CUBNP2-201ENST00000443534 1139 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC005077.1-201ENST00000449226 375 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 RNA5SP340-201ENST00000517132 107 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC244502.2-201ENST00000543361 851 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 MIR6809-201ENST00000612189 116 ntBASIC6.4□□□□□ -1.38
CISHQ9NSE2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
CISHQ9NSE2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CISHQ9NSE2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CISHQ9NSE2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.4□□□□□ -1.39
CISHQ9NSE2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CISHQ9NSE2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.4□□□□□ -1.39
CISHQ9NSE2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CISHQ9NSE2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
CISHQ9NSE2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.4□□□□□ -1.39
CISHQ9NSE2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CISHQ9NSE2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CISHQ9NSE2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.39
CISHQ9NSE2 AC012254.3-201ENST00000591183 2117 ntBASIC6.4□□□□□ -1.39
CISHQ9NSE2 QRSL1P1-201ENST00000400977 1540 ntBASIC6.4□□□□□ -1.39
CISHQ9NSE2 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 RNFT1P3-201ENST00000340898 1052 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 GAPDHP75-201ENST00000433910 943 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC110602.1-201ENST00000437414 318 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 RPS7P3-201ENST00000443360 580 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC023245.1-201ENST00000468501 517 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms