Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC091046.2-201ENST00000620775 665 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 AC139426.3-201ENST00000605648 2059 ntBASIC7.26□□□□□ -1.25
VTA1Q9NP79 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.26□□□□□ -1.25
VTA1Q9NP79 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VTA1Q9NP79 MAPK10-323ENST00000641493 3207 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AL139384.2-201ENST00000613809 3590 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 CYCSP52-201ENST00000422857 310 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 MTND4P24-201ENST00000424002 397 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 IGLV3-4-201ENST00000432300 244 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 SOCS5P1-201ENST00000440415 949 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 RN7SL834P-201ENST00000461450 286 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 CABYRP1-201ENST00000465493 1045 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 RN7SL369P-201ENST00000477138 299 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC016687.1-201ENST00000482574 353 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC090543.1-201ENST00000492168 485 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC022206.1-201ENST00000495947 347 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 RBBP4P1-201ENST00000502424 1276 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 OR7E99P-201ENST00000505750 922 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC118282.1-201ENST00000506408 765 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC095052.1-201ENST00000509955 863 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC010374.2-201ENST00000512933 535 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC090826.1-203ENST00000569235 490 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 ABI1P1-201ENST00000603375 1120 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AC108865.2-201ENST00000606881 432 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 AL355802.4-201ENST00000607635 548 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 OR7E91P-202ENST00000642062 1198 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 CDY11P-201ENST00000447168 1651 ntBASIC7.25□□□□□ -1.25
VTA1Q9NP79 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VTA1Q9NP79 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VTA1Q9NP79 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 HSPD1P9-201ENST00000420325 1636 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AL136984.1-201ENST00000607611 1893 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 TATDN2P3-201ENST00000452855 3665 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 MTCO1P45-201ENST00000431457 267 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC091390.2-201ENST00000432573 374 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 1236.2 ms