Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL442163.2-201ENST00000553912 710 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC097376.1-201ENST00000602907 997 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL158042.1-201ENST00000605338 460 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL121782.1-201ENST00000611242 413 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 MIR6774-201ENST00000614651 70 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 MIR7973-1-201ENST00000614683 76 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC023509.5-201ENST00000617434 807 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AC092608.3-201ENST00000625017 386 ntBASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRAIPQ9BWF2 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
TRAIPQ9BWF2 AC046144.1-201ENST00000478559 1853 ntBASIC8.09□□□□□ -1.12
TRAIPQ9BWF2 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.09□□□□□ -1.12
TRAIPQ9BWF2 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AL096816.1-201ENST00000623300 2920 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RNA5SP35-201ENST00000391257 129 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 TAF9BP1-201ENST00000396646 746 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RN7SKP59-201ENST00000410520 314 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 MTND4P20-201ENST00000424125 869 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 UBE2D3P1-201ENST00000436669 444 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RPS26P30-201ENST00000443431 335 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RSL24D1P3-201ENST00000449255 495 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 PTMAP1-205ENST00000455552 325 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AL133477.1-201ENST00000457472 514 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 RN7SL392P-201ENST00000473024 299 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC105391.1-201ENST00000503155 1045 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 IGKV2-29-201ENST00000521304 372 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 OR8A2P-201ENST00000528631 952 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AP001317.1-201ENST00000531194 960 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 FAM30C-201ENST00000561158 410 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AL365223.1-201ENST00000574864 1297 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 MIR378H-201ENST00000579966 83 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AL023806.2-201ENST00000603042 263 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC024085.1-201ENST00000604299 432 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC080013.6-201ENST00000606185 215 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC022106.1-201ENST00000612834 766 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms