Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 RNA5SP152-201ENST00000365184 110 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 RNU2-5P-201ENST00000410533 180 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 SETP15-201ENST00000412724 337 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 CLIC4P3-201ENST00000422221 752 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AHCYP8-201ENST00000425108 209 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 GAPDHP14-201ENST00000450472 937 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 CCNJP1-201ENST00000450600 1149 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 TUBBP11-201ENST00000472255 252 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 CYP4F27P-201ENST00000514557 494 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 HNRNPCP8-201ENST00000528764 888 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC027026.1-201ENST00000532323 742 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AL359219.2-201ENST00000555184 348 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC090286.3-201ENST00000573133 187 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC027334.1-201ENST00000603257 310 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC004890.3-201ENST00000605566 1095 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 SNORD96A-201ENST00000606577 79 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC006924.1-201ENST00000610750 559 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 MIR6762-201ENST00000613340 86 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 SCN1A-220ENST00000641603 12506 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RNA5SP427-201ENST00000365323 119 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 MRPS6P2-201ENST00000381143 370 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC226101.1-201ENST00000401483 387 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 MIR1231-201ENST00000408101 92 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 SNORA11D-201ENST00000408548 128 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 SNORA11E-201ENST00000408778 128 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RPL3P11-201ENST00000434028 1146 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 PHBP4-201ENST00000437447 837 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 NPM1P19-201ENST00000450070 712 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RAB28P2-201ENST00000454299 641 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC112187.1-201ENST00000455837 479 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RPL5P22-201ENST00000480199 884 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 OR9A1P-202ENST00000484361 945 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 RN7SL714P-201ENST00000487050 298 ntBASIC4.56□□□□□ -1.68
AP1S3Q96PC3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.56□□□□□ -1.68
AP1S3Q96PC3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms