Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CHMP4CQ96CF2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.66□□□□□ -1.18
CHMP4CQ96CF2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CHMP4CQ96CF2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CHMP4CQ96CF2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 DNM1P47-203ENST00000571780 12667 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 OOSP1-201ENST00000398992 1270 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 MIR1275-201ENST00000408770 80 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 GPN3P1-201ENST00000423883 535 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AL138899.2-201ENST00000439139 499 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 OR13K1P-201ENST00000444577 975 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 RPL37P23-201ENST00000492641 294 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC022206.1-201ENST00000495947 347 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC117525.1-201ENST00000515228 503 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AP005639.1-201ENST00000526939 192 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC012414.2-201ENST00000559474 187 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 OR1E3-201ENST00000575608 948 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 RN7SL475P-201ENST00000583379 298 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AP001885.1-201ENST00000621658 558 ntBASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.65□□□□□ -1.18
CHMP4CQ96CF2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC027575.3-201ENST00000583058 2747 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 NEK2P2-201ENST00000438441 1338 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 RNU6-618P-201ENST00000363518 112 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 RNU6-670P-201ENST00000364312 104 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AL512504.1-201ENST00000415494 778 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 GAPDHP34-201ENST00000432112 823 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 OR52I1-201ENST00000450052 1050 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC019084.1-201ENST00000457337 432 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 GM2AP2-201ENST00000491764 562 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC018645.1-201ENST00000505003 109 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC106800.3-201ENST00000511389 308 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 RNA5SP418-201ENST00000515951 117 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 NPM1P52-201ENST00000518264 846 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 IGKV1D-22-201ENST00000518953 324 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC006518.1-201ENST00000541449 943 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC020978.7-201ENST00000575953 1187 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 ADAD1P2-201ENST00000588476 646 ntBASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms