Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC018690.1-201ENST00000608144 626 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 AC004836.1-201ENST00000623032 634 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 AC091059.2-201ENST00000623355 614 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC126474.2-201ENST00000623268 1750 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
ERCC4Q92889 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.3□□□□□ -1.24
ERCC4Q92889 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 AL353763.1-201ENST00000624467 1628 ntBASIC7.3□□□□□ -1.24
ERCC4Q92889 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ERCC4Q92889 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 AC092701.1-201ENST00000623627 1551 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 BIN2P1-201ENST00000504996 1530 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 RNA5SP321-201ENST00000362722 111 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 RNA5SP429-201ENST00000363688 109 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 MRPL32P1-201ENST00000406301 247 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC4Q92889 MRPS21P5-201ENST00000417885 231 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC4Q92889 CYCSP52-201ENST00000422857 310 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC4Q92889 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.29□□□□□ -1.24
ERCC4Q92889 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC4Q92889 C1DP3-201ENST00000455013 423 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 RBMY2EP-202ENST00000456360 940 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 RN7SL849P-201ENST00000485236 295 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AL390198.2-201ENST00000510553 222 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AC096661.1-201ENST00000515870 822 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AP001804.1-201ENST00000526868 919 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AP005639.1-201ENST00000526939 192 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.29□□□□□ -1.24
ERCC4Q92889 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.29□□□□□ -1.24
ERCC4Q92889 MIR4312-201ENST00000579909 76 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 MIR378H-201ENST00000579966 83 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 RN7SL339P-201ENST00000580597 296 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC4Q92889 AC006946.3-201ENST00000609791 756 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AC097478.2-201ENST00000610572 514 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AC007671.1-201ENST00000616957 830 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 AC007683.2-201ENST00000624681 714 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC4Q92889 AC018628.1-201ENST00000624147 3819 ntBASIC7.29□□□□□ -1.24
ERCC4Q92889 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
ERCC4Q92889 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC4Q92889 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC4Q92889 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC068769.1-201ENST00000474767 2426 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ERCC4Q92889 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AL050335.1-201ENST00000396909 869 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ERCC4Q92889 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 RN7SKP91-201ENST00000410852 288 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 RPS3AP25-201ENST00000411660 793 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 SPATA20P1-201ENST00000423089 438 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 GAPDHP20-201ENST00000444107 1007 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 HMGN1P5-201ENST00000448591 263 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AL133480.2-201ENST00000456723 487 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms