Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC017019.1-201ENST00000426129 261 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AL391987.1-201ENST00000441025 200 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 PPIAP7-201ENST00000454070 489 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 CYCSP53-201ENST00000455540 265 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC135999.1-201ENST00000478962 479 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 OR9N1P-201ENST00000491296 333 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC025458.1-201ENST00000506046 166 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 KHDC1P1-201ENST00000511053 508 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 IGHV4-55-201ENST00000520889 368 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AP000620.1-201ENST00000527147 504 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC005000.1-201ENST00000536192 288 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC092332.1-201ENST00000563684 829 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 BX323046.1-201ENST00000610145 535 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC024884.1-201ENST00000620583 399 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 FO681491.1-202ENST00000623392 737 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 MIR4302-201ENST00000638058 60 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC007485.2-201ENST00000623493 1667 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 OLMALINC-203ENST00000641087 3779 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC110597.1-201ENST00000562669 3176 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AL033543.1-201ENST00000623440 13454 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 MIR130B-202ENST00000385018 82 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 RPL17P35-201ENST00000432217 549 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 MRPS33P4-201ENST00000434892 317 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AL590762.3-201ENST00000436372 640 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AL158068.1-201ENST00000506116 616 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC083906.1-201ENST00000509298 406 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 MTND4LP25-201ENST00000570218 163 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 MIR3614-201ENST00000581261 86 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 RFPL4AP6-201ENST00000616792 846 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 AC022726.2-201ENST00000634673 547 ntBASIC6.4□□□□□ -1.38
HMGB4Q8WW32 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGB4Q8WW32 NEK2P4-201ENST00000425793 1329 ntBASIC6.4□□□□□ -1.39
HMGB4Q8WW32 AL512310.3-201ENST00000547023 1335 ntBASIC6.4□□□□□ -1.39
HMGB4Q8WW32 AL136984.1-201ENST00000607611 1893 ntBASIC6.4□□□□□ -1.39
HMGB4Q8WW32 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.4□□□□□ -1.39
HMGB4Q8WW32 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms