Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC71LQ8N9Z2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC71LQ8N9Z2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
CCDC71LQ8N9Z2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC71LQ8N9Z2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AL158152.1-201ENST00000602652 1435 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 DDX18P6-201ENST00000450119 1997 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MTHFD2P5-201ENST00000320415 844 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SKP191-201ENST00000364713 306 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MIR1231-201ENST00000408101 92 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC002524.1-201ENST00000411687 547 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC083862.1-201ENST00000427378 1242 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC013410.1-201ENST00000436223 1232 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 RPSAP40-201ENST00000442343 891 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 CUBNP2-201ENST00000443534 1139 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AL121578.2-201ENST00000448797 447 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC079080.1-201ENST00000479841 822 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 RPL23AP40-201ENST00000487630 390 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC105420.1-201ENST00000504389 582 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC093870.1-201ENST00000506837 213 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC092865.1-201ENST00000544395 1023 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC010287.1-201ENST00000566916 357 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SL426P-201ENST00000579106 295 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AP003072.5-201ENST00000623872 773 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AL355480.4-201ENST00000626823 69 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC093849.1-201ENST00000563631 2209 ntBASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC71LQ8N9Z2 AC140134.1-201ENST00000511830 3544 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AC016583.1-201ENST00000624221 2431 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 SAMM50P1-201ENST00000455403 1399 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SKP166-201ENST00000410812 305 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 RPL18AP14-201ENST00000417685 526 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 GRPEL2P2-201ENST00000421856 670 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 OR52S1P-201ENST00000427016 937 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 RPL5P2-201ENST00000429598 854 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 FECHP1-201ENST00000431896 1214 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AC092106.2-201ENST00000436597 487 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AC013403.1-201ENST00000436954 263 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 PCMTD1P3-201ENST00000451824 472 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 AKR1D1P1-201ENST00000457236 936 ntBASIC5.07□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SL72P-201ENST00000460697 269 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms