Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 IGLV3-4-201ENST00000432300 244 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 ARMC4P1-201ENST00000438905 707 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 RPL12P49-201ENST00000441100 121 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 HIGD1AP16-201ENST00000450986 258 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 RAB28P2-201ENST00000454299 641 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AL133351.3-201ENST00000454998 193 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 MRPS5P3-201ENST00000515577 166 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 RNA5SP206-201ENST00000516703 121 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 NATP-201ENST00000523491 878 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 NPM1P5-201ENST00000557228 838 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 NDUFB9P1-201ENST00000604683 510 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC010325.3-201ENST00000641084 394 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 AC005261.6-201ENST00000623072 1387 ntBASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
TTC9CQ8N5M4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL731532.1-201ENST00000623972 4236 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 RNA5SP346-201ENST00000363541 121 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 RN7SKP144-201ENST00000411108 279 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC016027.5-201ENST00000427227 210 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL645936.1-201ENST00000441979 518 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC007383.1-201ENST00000445875 636 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 RPL23AP60-201ENST00000450011 454 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC073594.1-201ENST00000462065 364 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL355032.1-201ENST00000472981 438 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC095052.1-201ENST00000509955 863 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC090958.1-201ENST00000511122 351 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 Y_RNA.710-201ENST00000516975 110 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC005632.2-201ENST00000564271 828 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 MT1CP-201ENST00000567054 174 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC020916.2-201ENST00000591242 360 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC027334.1-201ENST00000603257 310 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL591167.1-201ENST00000607321 456 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AL109924.4-201ENST00000623089 670 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 OR7A1P-202ENST00000641542 1158 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC079753.1-201ENST00000623243 3868 ntBASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TTC9CQ8N5M4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TTC9CQ8N5M4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.86□□□□□ -1.63
TTC9CQ8N5M4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TTC9CQ8N5M4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms