Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 CASC19-243ENST00000641588 1546 ntBASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM48Q8IWZ4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 MAPK10-383ENST00000642032 3390 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 OR5H2-201ENST00000355273 945 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP184-201ENST00000362348 333 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RNA5SP152-201ENST00000365184 110 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 TAF9BP2-201ENST00000400856 499 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 SLC20A1P1-201ENST00000413906 956 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RPL18AP14-201ENST00000417685 526 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 OR5M12P-201ENST00000423388 929 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC000089.1-201ENST00000424559 801 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 DEFB130D-201ENST00000426866 237 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RPL34P27-201ENST00000428810 349 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC007563.3-201ENST00000433233 371 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 BUD31P2-201ENST00000449374 300 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP198-201ENST00000459286 306 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL790P-201ENST00000474043 298 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RPS14P8-201ENST00000478778 369 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL379P-201ENST00000479912 293 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 GAPDHP71-201ENST00000511530 1003 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC021193.1-201ENST00000511607 420 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 PPIAP6-201ENST00000557078 499 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC009094.1-201ENST00000564443 426 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC027796.1-201ENST00000575593 512 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CCDC58P3-201ENST00000590792 430 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC010503.3-201ENST00000594355 540 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AL049840.6-201ENST00000604583 345 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC080013.3-201ENST00000606839 578 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 PART1_2.1-201ENST00000612397 250 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CDY7P-201ENST00000429883 1604 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AC009831.5-201ENST00000624000 3189 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms