Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC28Q86X40 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LRRC28Q86X40 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC28Q86X40 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC28Q86X40 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.48□□□□□ -1.53
LRRC28Q86X40 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
LRRC28Q86X40 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
LRRC28Q86X40 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC28Q86X40 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC090220.1-201ENST00000593078 1699 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC005261.2-201ENST00000593427 4258 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 HDAC1P2-201ENST00000453661 1398 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC093671.1-201ENST00000624981 2929 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 RNU1-84P-201ENST00000365447 164 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC245036.1-201ENST00000391727 309 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 THEM7P-201ENST00000419556 672 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 USP24P1-201ENST00000433802 779 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AL731534.1-201ENST00000434711 269 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 LINC00328-2P-201ENST00000436585 219 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 VPS25P1-201ENST00000455691 508 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC112187.1-201ENST00000455837 479 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 RPL5P14-201ENST00000494197 878 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AL049779.3-201ENST00000557141 606 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC023968.1-201ENST00000560719 475 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC133552.4-201ENST00000576103 676 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC090616.1-201ENST00000583895 447 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC063977.7-201ENST00000594454 337 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 AC009779.8-202ENST00000607990 932 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 MIR6085-201ENST00000618314 110 ntBASIC5.47□□□□□ -1.53
LRRC28Q86X40 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC28Q86X40 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
LRRC28Q86X40 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.46□□□□□ -1.53
LRRC28Q86X40 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
LRRC28Q86X40 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.46□□□□□ -1.53
LRRC28Q86X40 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.46□□□□□ -1.53
LRRC28Q86X40 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 RNA5SP453-201ENST00000362503 119 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC099535.1-201ENST00000408928 371 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 RPS3AP38-201ENST00000435889 763 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 RPL29P23-201ENST00000486188 442 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 AL117692.1-201ENST00000494283 713 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC018645.1-201ENST00000505003 109 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 SNORA74.1-201ENST00000516320 180 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 RPA2P3-201ENST00000533268 770 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC023389.2-201ENST00000580031 955 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 MIR132-201ENST00000591554 101 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 WBP1LP12-201ENST00000604449 331 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 AC012676.3-201ENST00000614983 479 ntBASIC5.46□□□□□ -1.54
LRRC28Q86X40 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms