Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 OR4A40P-201ENST00000533878 948 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 TDGP1-201ENST00000543961 1229 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC009120.3-201ENST00000563335 499 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC117490.2-201ENST00000610042 594 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC123769.1-201ENST00000530992 3192 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC092070.2-203ENST00000598377 3644 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 LCN1P2-201ENST00000372030 223 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC003045.1-201ENST00000398779 713 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 RPL7P58-201ENST00000402913 758 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 FAM183DP-201ENST00000421987 399 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 GPN3P1-201ENST00000423883 535 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 RARRES2P3-201ENST00000457739 473 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 SLC25A51P1-201ENST00000468432 871 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 KHDC1P1-201ENST00000511053 508 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 SNORA74.1-201ENST00000516320 180 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC113191.1-201ENST00000517759 403 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC135983.3-201ENST00000528049 1226 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 TRAV11-201ENST00000539512 339 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 HNRNPCP1-201ENST00000556181 766 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 OR7M1P-201ENST00000608946 533 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 OR8G7P-201ENST00000616658 848 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 MIR6823-201ENST00000622118 61 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC089999.3-201ENST00000622440 577 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC009120.7-201ENST00000623452 780 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC007342.9-201ENST00000623877 1385 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AC119674.1-213ENST00000641177 1386 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 SMG1P5-202ENST00000529428 4219 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 SMG1P2-201ENST00000566127 4221 ntBASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NHLRC1Q6VVB1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 AC005725.1-201ENST00000577346 2607 ntBASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NHLRC1Q6VVB1 BRAFP1-201ENST00000445336 2703 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms