Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 RNA5SP333-201ENST00000363466 118 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 RNA5SP334-201ENST00000364825 118 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 RN7SKP273-201ENST00000411392 314 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 RPEP1-201ENST00000504507 658 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 OR8G3P-201ENST00000533406 921 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 AL390318.1-201ENST00000624564 687 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 AC092725.2-201ENST00000567658 1389 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 AL353763.1-201ENST00000624467 1628 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42BPAQ5VT25 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 RNU1-19P-201ENST00000363306 165 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC245047.2-201ENST00000441060 530 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 RAB28P2-201ENST00000454299 641 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC044860.2-201ENST00000561005 179 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AL445222.1-201ENST00000607259 628 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AL512329.2-201ENST00000607350 548 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AL118522.2-201ENST00000616045 615 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 TMEM75-201ENST00000624314 2165 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC019205.1-201ENST00000421830 730 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC079922.1-201ENST00000443291 359 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AURKAPS1-201ENST00000451805 1212 ntBASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42BPAQ5VT25 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 MIR1286-201ENST00000408112 78 ntBASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 RPS6P23-201ENST00000413224 722 ntBASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 MIR132-201ENST00000591554 101 ntBASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 SUGT1P3-202ENST00000604259 383 ntBASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 AC024589.2-201ENST00000605642 1294 ntBASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
CDC42BPAQ5VT25 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.84□□□□□ -1
CDC42BPAQ5VT25 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.84□□□□□ -1
CDC42BPAQ5VT25 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC011742.2-201ENST00000443818 352 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 OR7E116P-201ENST00000448529 957 ntBASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms