Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC006463.2-201ENST00000473326 348 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC112225.1-201ENST00000508230 297 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 BUB1P1-201ENST00000603541 607 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL008723.3-201ENST00000608926 449 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC083809.1-201ENST00000615051 472 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 FO393409.1-201ENST00000399325 1372 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 HDAC1P2-201ENST00000453661 1398 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 CUBNP3-201ENST00000457461 1784 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC127024.8-201ENST00000623719 2094 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AL445466.1-201ENST00000448432 357 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 RPL35AP19-201ENST00000469425 329 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC099521.1-201ENST00000482557 334 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 OR9L1P-201ENST00000529493 933 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 MAPK10-350ENST00000641777 965 ntBASIC5.91□□□□□ -1.46
RIF1Q5UIP0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIF1Q5UIP0 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC013442.1-201ENST00000397347 228 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC009804.1-201ENST00000400949 179 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AL590139.1-201ENST00000416267 400 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AL022331.1-201ENST00000429025 477 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC245047.1-201ENST00000433276 873 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC100832.1-201ENST00000471945 383 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 RPS3AP15-201ENST00000483874 781 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC105233.1-201ENST00000498840 781 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 PGAM1P13-201ENST00000507497 754 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 SNORA43.3-201ENST00000517240 103 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC010463.3-201ENST00000594077 500 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 AC007114.2-201ENST00000576014 4281 ntBASIC5.9□□□□□ -1.46
RIF1Q5UIP0 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC5.9□□□□□ -1.46
RIF1Q5UIP0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms