Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 OR11H13P-201ENST00000359695 979 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AL158827.1-201ENST00000416300 391 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AL139158.1-201ENST00000424719 340 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 MTCYBP29-201ENST00000436327 1006 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 ARMC4P1-201ENST00000438905 707 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 RPL5P10-201ENST00000445207 894 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC097359.1-201ENST00000447946 463 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC005017.1-201ENST00000482002 490 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 OR11I1P-201ENST00000486033 954 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC037479.1-201ENST00000558361 625 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 MTND1P8-201ENST00000571424 950 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 MIR3154-201ENST00000577829 84 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC027334.1-201ENST00000603257 310 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AL499605.1-201ENST00000604628 403 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC111186.1-201ENST00000604684 130 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AL035410.2-201ENST00000604963 864 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC093875.1-201ENST00000623688 504 ntBASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 AC104581.5-201ENST00000624171 7141 ntBASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 TNPO1P2-201ENST00000426249 2665 ntBASIC7.71□□□□□ -1.17
CCDC144BQ3MJ40 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 RN7SKP47-201ENST00000365347 328 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AL391422.1-201ENST00000402155 436 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 RPL23AP18-201ENST00000416139 468 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 Z84478.1-201ENST00000438230 1219 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AL353898.1-201ENST00000444055 238 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 RPL6P5-201ENST00000445678 828 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 MEF2AP1-201ENST00000454867 863 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC083806.1-201ENST00000468934 316 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 LARP7P4-201ENST00000481075 878 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC122718.2-201ENST00000505325 591 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC073581.1-201ENST00000519036 575 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 EEF1B2P2-201ENST00000519625 676 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 SNRPCP6-201ENST00000528310 210 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 OR4A40P-201ENST00000533878 948 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms