Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MTND4P28-201ENST00000426217 387 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 MTCO2P19-201ENST00000427513 598 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC002553.1-201ENST00000442828 802 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AL158214.1-201ENST00000444423 404 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 COX6CP2-201ENST00000444980 225 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 RPSAP49-201ENST00000445182 886 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH1Q08174 IGBP1P3-201ENST00000447449 1000 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 ZNF114P1-201ENST00000453500 292 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 RNU7-140P-201ENST00000459546 60 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 RN7SL233P-201ENST00000469988 277 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC021006.1-201ENST00000489849 553 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 ABCA11P-202ENST00000504019 2110 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 PGBD4P4-201ENST00000509673 613 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH1Q08174 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 SNX18P27-201ENST00000523611 779 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.23□□□□□ -1.25
PCDH1Q08174 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC012435.1-202ENST00000568772 240 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 MIR5708-201ENST00000579723 85 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC012417.1-201ENST00000582307 1039 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.23□□□□□ -1.25
PCDH1Q08174 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 Z99129.1-201ENST00000612510 255 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC026368.1-201ENST00000614934 690 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 MIR6807-201ENST00000621968 92 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDH1Q08174 UGT2B25P-201ENST00000511504 1586 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC007923.2-201ENST00000584218 1591 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 MTND4P31-201ENST00000425607 1343 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AP003119.3-201ENST00000566747 4192 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 NCOA4P2-201ENST00000340589 1813 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 PSG10P-201ENST00000501199 1500 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH1Q08174 RNA5SP483-201ENST00000363431 118 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDH1Q08174 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 MSRB1P1-201ENST00000396851 354 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC127537.1-201ENST00000418183 748 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 RPSAP59-201ENST00000421048 890 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 RPL4P4-201ENST00000422486 1284 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH1Q08174 RPL21P43-201ENST00000425440 472 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AL035458.1-201ENST00000433096 585 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AL596276.1-201ENST00000434465 418 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AL590103.1-201ENST00000434488 307 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 RPL5P27-201ENST00000437011 881 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AL121601.2-201ENST00000438019 707 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AC002486.2-201ENST00000447806 590 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 RPS29P5-201ENST00000452777 171 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC126182.1-201ENST00000478134 357 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDH1Q08174 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH1Q08174 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH1Q08174 AC233724.10-201ENST00000510454 409 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 ADI1P2-201ENST00000514945 429 ntBASIC7.22□□□□□ -1.25
PCDH1Q08174 HNRNPKP5-201ENST00000515300 253 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms