Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
GABPAQ06546 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
GABPAQ06546 RNF19BPY-201ENST00000458209 1550 ntBASIC7.12□□□□□ -1.27
GABPAQ06546 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
GABPAQ06546 RAD17P2-201ENST00000451754 1977 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
GABPAQ06546 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
GABPAQ06546 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
GABPAQ06546 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 SELENOWP1-201ENST00000322792 252 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
GABPAQ06546 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
GABPAQ06546 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.11□□□□□ -1.27
GABPAQ06546 AL355355.1-201ENST00000442900 793 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 AP006222.1-205ENST00000450734 457 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 AL122020.1-201ENST00000472287 459 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.11□□□□□ -1.27
GABPAQ06546 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 RN7SKP98-201ENST00000517070 156 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.11□□□□□ -1.27
GABPAQ06546 AC135626.1-201ENST00000556983 435 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.11□□□□□ -1.27
GABPAQ06546 AC067852.5-201ENST00000589299 310 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 COX6CP7-201ENST00000597056 208 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.11□□□□□ -1.27
GABPAQ06546 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.11□□□□□ -1.27
GABPAQ06546 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
GABPAQ06546 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
GABPAQ06546 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
GABPAQ06546 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.11□□□□□ -1.27
GABPAQ06546 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
GABPAQ06546 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
GABPAQ06546 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
GABPAQ06546 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
GABPAQ06546 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 CCNT2P1-201ENST00000423082 1315 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 RN7SKP69-201ENST00000365390 305 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 CHEK2P5-201ENST00000423877 246 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.1□□□□□ -1.27
GABPAQ06546 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.1□□□□□ -1.27
GABPAQ06546 AL391987.1-201ENST00000441025 200 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 OR2AF1P-201ENST00000454899 889 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 AC112187.1-201ENST00000455837 479 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.1□□□□□ -1.27
GABPAQ06546 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 OR56A7P-201ENST00000524865 941 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 PCNAP4-201ENST00000532690 730 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.1□□□□□ -1.27
GABPAQ06546 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.1□□□□□ -1.27
GABPAQ06546 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 AC020978.7-201ENST00000575953 1187 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 AC127024.6-201ENST00000621598 424 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.1□□□□□ -1.27
GABPAQ06546 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.1□□□□□ -1.27
GABPAQ06546 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.1□□□□□ -1.27
GABPAQ06546 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.1□□□□□ -1.27
GABPAQ06546 Z93929.1-201ENST00000418200 1475 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 OR13C1P-202ENST00000641378 2919 ntBASIC7.1□□□□□ -1.27
GABPAQ06546 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
GABPAQ06546 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 AC119674.1-213ENST00000641177 1386 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.09□□□□□ -1.27
GABPAQ06546 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.09□□□□□ -1.27
GABPAQ06546 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
GABPAQ06546 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.09□□□□□ -1.27
GABPAQ06546 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
GABPAQ06546 SNORA17A-201ENST00000391185 133 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 RN7SKP206-201ENST00000410823 293 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.09□□□□□ -1.27
GABPAQ06546 AC068138.1-201ENST00000412635 217 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms