Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 OR3D1P-201ENST00000438288 955 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP1Q04837 E2F6P3-201ENST00000441743 743 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AL845321.1-201ENST00000444603 348 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 POU5F1P5-201ENST00000445059 658 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 AC083899.1-201ENST00000454465 3819 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 RPSAP51-201ENST00000497462 645 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 RNA5SP418-201ENST00000515951 117 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC008055.1-201ENST00000547032 609 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC011193.2-201ENST00000582638 367 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 MIR4660-201ENST00000583549 74 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.04□□□□□ -1.6
SSBP1Q04837 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP1Q04837 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP1Q04837 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP1Q04837 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 AC092376.2-201ENST00000622621 4116 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 CAP1P2-201ENST00000417455 1409 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP1Q04837 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSBP1Q04837 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.04□□□□□ -1.6
SSBP1Q04837 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP1Q04837 TCP11X1-202ENST00000622971 1372 ntBASIC5.04□□□□□ -1.6
SSBP1Q04837 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 NCOA4P2-201ENST00000340589 1813 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 OR10R3P-201ENST00000361688 942 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 U3.7-201ENST00000363668 216 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 CDC42P6-201ENST00000421246 576 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AC112492.2-201ENST00000432774 1030 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AL590399.4-201ENST00000436561 601 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AL663074.2-201ENST00000440621 479 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.03□□□□□ -1.6
SSBP1Q04837 HIGD1AP16-201ENST00000450986 258 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 RPS3AP49-201ENST00000472161 790 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AF305872.1-201ENST00000485217 471 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 RPL5P3-201ENST00000493817 889 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.03□□□□□ -1.6
SSBP1Q04837 OR7E158P-201ENST00000524483 910 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AL035417.2-201ENST00000603887 796 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AL589743.6-201ENST00000611025 117 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 AC021766.1-201ENST00000624404 741 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AC073488.6-201ENST00000632293 754 ntBASIC5.03□□□□□ -1.6
SSBP1Q04837 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.03□□□□□ -1.6
SSBP1Q04837 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.03□□□□□ -1.6
SSBP1Q04837 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
SSBP1Q04837 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSBP1Q04837 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSBP1Q04837 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSBP1Q04837 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.02□□□□□ -1.61
SSBP1Q04837 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSBP1Q04837 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms