Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNA5SP453-201ENST00000362503 119 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 SNORD35A-201ENST00000363389 86 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 RNU1-84P-201ENST00000365447 164 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC092634.1-201ENST00000366505 199 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 RN7SKP151-201ENST00000410230 316 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC006509.1-201ENST00000420788 634 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL645939.3-201ENST00000435408 225 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL020997.1-201ENST00000446554 349 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 NPM1P9-201ENST00000453156 844 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL445687.2-201ENST00000458156 728 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 RN7SL413P-201ENST00000482700 297 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 RN7SL267P-201ENST00000485107 261 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 SLC25A51P2-201ENST00000535708 889 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC133552.4-201ENST00000576103 676 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC036176.3-201ENST00000602456 418 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL591222.2-201ENST00000604443 754 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 MIR7159-201ENST00000620587 66 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 MAPK10-338ENST00000641647 3362 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 RPL31P11-201ENST00000426558 1558 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 MRRFP1-201ENST00000435941 1675 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 PARP4P2-201ENST00000446672 3326 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 MIR433-201ENST00000384837 93 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 MIR431-201ENST00000385266 114 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC026310.1-201ENST00000396004 378 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 GNG5P5-201ENST00000420444 220 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 COL11A2P1-205ENST00000441798 676 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 RPL36AP55-201ENST00000454114 305 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 RN7SL72P-201ENST00000460697 269 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC093719.1-201ENST00000480427 441 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC008429.4-201ENST00000521201 182 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 OR9G2P-201ENST00000533326 880 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 TPRX1P1-201ENST00000557620 319 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 RN7SL371P-201ENST00000578099 267 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC010503.3-201ENST00000594355 540 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC006363.1-201ENST00000603806 463 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AL390877.1-201ENST00000605704 214 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AL022394.1-201ENST00000606979 292 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms