Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC090114.3-201ENST00000479267 829 ntBASIC6.78□□□□□ -1.32
YBX1P67809 EIF4E2P2-201ENST00000492033 736 ntBASIC6.78□□□□□ -1.32
YBX1P67809 RN7SL104P-201ENST00000498686 293 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.78□□□□□ -1.32
YBX1P67809 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.78□□□□□ -1.32
YBX1P67809 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 RNU6-1129P-201ENST00000515964 104 ntBASIC6.78□□□□□ -1.32
YBX1P67809 BUD31P1-201ENST00000521828 359 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.78□□□□□ -1.32
YBX1P67809 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 OR5M6P-201ENST00000530227 937 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC022880.1-201ENST00000534017 973 ntBASIC6.78□□□□□ -1.32
YBX1P67809 NOP56P3-201ENST00000549457 385 ntBASIC6.78□□□□□ -1.32
YBX1P67809 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.78□□□□□ -1.32
YBX1P67809 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.78□□□□□ -1.32
YBX1P67809 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 AC027281.1-201ENST00000574178 758 ntBASIC6.78□□□□□ -1.32
YBX1P67809 MIR3135A-201ENST00000578460 77 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.78□□□□□ -1.32
YBX1P67809 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.78□□□□□ -1.32
YBX1P67809 IGLJCOR18-201ENST00000584002 424 ntBASIC6.78□□□□□ -1.32
YBX1P67809 MIR4428-201ENST00000584884 73 ntBASIC6.78□□□□□ -1.32
YBX1P67809 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 COX6CP16-201ENST00000603667 216 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.78□□□□□ -1.32
YBX1P67809 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 AC245407.2-201ENST00000614199 451 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC015540.1-201ENST00000615828 501 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AL158163.2-201ENST00000619110 700 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC026108.1-201ENST00000635444 547 ntBASIC6.78□□□□□ -1.32
YBX1P67809 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.78□□□□□ -1.32
YBX1P67809 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 YES1P1-201ENST00000418510 1628 ntBASIC6.78□□□□□ -1.32
YBX1P67809 AC027514.1-201ENST00000588561 1603 ntBASIC6.78□□□□□ -1.32
YBX1P67809 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
YBX1P67809 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.78□□□□□ -1.32
YBX1P67809 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
YBX1P67809 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.77□□□□□ -1.32
YBX1P67809 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
YBX1P67809 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.77□□□□□ -1.33
YBX1P67809 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
YBX1P67809 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.77□□□□□ -1.33
YBX1P67809 ASNSP6-201ENST00000592770 1618 ntBASIC6.77□□□□□ -1.33
YBX1P67809 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
YBX1P67809 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
YBX1P67809 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
YBX1P67809 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
YBX1P67809 PDCL3P5-201ENST00000398028 722 ntBASIC6.77□□□□□ -1.33
YBX1P67809 AL603865.2-201ENST00000401679 213 ntBASIC6.77□□□□□ -1.33
YBX1P67809 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
YBX1P67809 RN7SKP148-201ENST00000410179 275 ntBASIC6.77□□□□□ -1.33
YBX1P67809 UBTFL2-201ENST00000411859 1191 ntBASIC6.77□□□□□ -1.33
YBX1P67809 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.77□□□□□ -1.33
YBX1P67809 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.77□□□□□ -1.33
YBX1P67809 GPN3P1-201ENST00000423883 535 ntBASIC6.77□□□□□ -1.33
YBX1P67809 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 IFNNP1-201ENST00000429219 553 ntBASIC6.77□□□□□ -1.33
YBX1P67809 AL121916.1-201ENST00000429405 308 ntBASIC6.77□□□□□ -1.33
YBX1P67809 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 PMS2P9-201ENST00000441237 515 ntBASIC6.77□□□□□ -1.33
YBX1P67809 SDHCP3-201ENST00000445371 506 ntBASIC6.77□□□□□ -1.33
YBX1P67809 AC009961.3-201ENST00000449832 765 ntBASIC6.77□□□□□ -1.33
YBX1P67809 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.77□□□□□ -1.33
YBX1P67809 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.77□□□□□ -1.33
YBX1P67809 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 MTND3P7-201ENST00000474435 343 ntBASIC6.77□□□□□ -1.33
YBX1P67809 AC025271.1-201ENST00000485045 429 ntBASIC6.77□□□□□ -1.33
YBX1P67809 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.77□□□□□ -1.33
YBX1P67809 RN7SL612P-201ENST00000497704 295 ntBASIC6.77□□□□□ -1.33
YBX1P67809 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.77□□□□□ -1.33
YBX1P67809 SCARNA6-201ENST00000515982 265 ntBASIC6.77□□□□□ -1.33
YBX1P67809 RNA5SP96-201ENST00000516041 107 ntBASIC6.77□□□□□ -1.33
YBX1P67809 SEC11B-201ENST00000518383 499 ntBASIC6.77□□□□□ -1.33
YBX1P67809 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.77□□□□□ -1.33
YBX1P67809 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.77□□□□□ -1.33
YBX1P67809 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.77□□□□□ -1.33
YBX1P67809 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.77□□□□□ -1.33
YBX1P67809 AL135978.1-201ENST00000553618 1266 ntBASIC6.77□□□□□ -1.33
YBX1P67809 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
YBX1P67809 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms