Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TCEA1P2-201ENST00000420496 906 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 PTP4A1P1-201ENST00000420539 515 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 SPATA20P1-201ENST00000423089 438 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 PRUNEP1-201ENST00000425846 705 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 Z68868.1-201ENST00000429048 544 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC069277.2-201ENST00000454211 432 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AL139156.3-201ENST00000454802 394 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 DUXAP8-207ENST00000456786 622 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 SULT1D1P-201ENST00000458020 882 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC008427.1-201ENST00000503102 655 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 UBE2V1P12-201ENST00000503954 474 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 RN7SKP196-201ENST00000516267 345 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 MTND2P32-201ENST00000521584 1038 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 BTG1P1-201ENST00000540396 508 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC087888.1-201ENST00000550884 1254 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AL049838.1-201ENST00000563647 981 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC092718.4-201ENST00000566639 716 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC023825.1-201ENST00000566704 1030 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.07□□□□□ -1.44
SUMO3P55854 RN7SL32P-201ENST00000580514 281 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.07□□□□□ -1.44
SUMO3P55854 DUXAP10-204ENST00000612052 616 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC084824.4-201ENST00000620106 731 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AP000770.2-201ENST00000623694 100 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
SUMO3P55854 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.07□□□□□ -1.44
SUMO3P55854 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.07□□□□□ -1.44
SUMO3P55854 AC006927.4-201ENST00000639187 543 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SUMO3P55854 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 AC068733.2-201ENST00000605434 1418 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 AL596244.1-201ENST00000567068 3779 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 AC007342.7-201ENST00000624610 2337 ntBASIC6.07□□□□□ -1.44
SUMO3P55854 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SUMO3P55854 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 NEPNP-201ENST00000404786 1371 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SUMO3P55854 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 OR7A2P-201ENST00000304105 930 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SUMO3P55854 AC010894.1-201ENST00000313760 361 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SUMO3P55854 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SUMO3P55854 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.06□□□□□ -1.44
SUMO3P55854 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SUMO3P55854 AP002784.2-201ENST00000397300 549 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 FDPSP5-201ENST00000399474 1057 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.06□□□□□ -1.44
SUMO3P55854 AC096533.1-201ENST00000411645 353 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC017035.1-201ENST00000411999 1115 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AL359092.1-201ENST00000417156 265 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC093716.1-201ENST00000435923 377 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 GTF2IP14-201ENST00000441415 586 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 RRM2P4-201ENST00000441721 562 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AL355355.1-201ENST00000442900 793 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC093166.3-201ENST00000448785 303 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.06□□□□□ -1.44
SUMO3P55854 RARRES2P3-201ENST00000457739 473 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 AC104164.3-201ENST00000467363 1258 ntBASIC6.06□□□□□ -1.44
SUMO3P55854 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms