Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC094019.1-201ENST00000434678 472 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 OR3D1P-201ENST00000438288 955 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 AL031681.1-201ENST00000443304 400 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 CXCR2P1-202ENST00000443392 1074 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 RN7SL393P-201ENST00000463588 296 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 RPS4XP17-201ENST00000479057 754 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.93□□□□□ -1.46
PKNOX1P55347 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC090958.1-201ENST00000511122 351 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC244502.2-201ENST00000543361 851 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC024267.2-201ENST00000582737 417 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.93□□□□□ -1.46
PKNOX1P55347 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.93□□□□□ -1.46
PKNOX1P55347 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.93□□□□□ -1.46
PKNOX1P55347 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.93□□□□□ -1.46
PKNOX1P55347 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.93□□□□□ -1.46
PKNOX1P55347 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.93□□□□□ -1.46
PKNOX1P55347 AC024587.1-201ENST00000505925 2157 ntBASIC5.93□□□□□ -1.46
PKNOX1P55347 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PKNOX1P55347 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKNOX1P55347 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PKNOX1P55347 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.92□□□□□ -1.46
PKNOX1P55347 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 RN7SKP144-201ENST00000411108 279 ntBASIC5.92□□□□□ -1.46
PKNOX1P55347 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.92□□□□□ -1.46
PKNOX1P55347 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.92□□□□□ -1.46
PKNOX1P55347 TRBV5-2-201ENST00000489095 273 ntBASIC5.92□□□□□ -1.46
PKNOX1P55347 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.92□□□□□ -1.46
PKNOX1P55347 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.92□□□□□ -1.46
PKNOX1P55347 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.92□□□□□ -1.46
PKNOX1P55347 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.92□□□□□ -1.46
PKNOX1P55347 AL136097.3-201ENST00000611097 505 ntBASIC5.92□□□□□ -1.46
PKNOX1P55347 AC022106.1-201ENST00000612834 766 ntBASIC5.92□□□□□ -1.46
PKNOX1P55347 AC211486.4-201ENST00000621495 113 ntBASIC5.92□□□□□ -1.46
PKNOX1P55347 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.92□□□□□ -1.46
PKNOX1P55347 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PKNOX1P55347 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.92□□□□□ -1.46
PKNOX1P55347 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PKNOX1P55347 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.91□□□□□ -1.46
PKNOX1P55347 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PKNOX1P55347 YWHAZP4-201ENST00000392459 708 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PKNOX1P55347 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.91□□□□□ -1.46
PKNOX1P55347 AC073410.1-201ENST00000435125 589 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 PSMD8P1-201ENST00000436275 769 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AC013403.1-201ENST00000436954 263 ntBASIC5.91□□□□□ -1.46
PKNOX1P55347 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms