Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL163152.1-201ENST00000642001 374 ntBASIC6.16□□□□□ -1.42
NR1H2P55055 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.16□□□□□ -1.42
NR1H2P55055 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.16□□□□□ -1.42
NR1H2P55055 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.16□□□□□ -1.42
NR1H2P55055 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NR1H2P55055 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NR1H2P55055 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NR1H2P55055 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NR1H2P55055 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NR1H2P55055 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.16□□□□□ -1.42
NR1H2P55055 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.16□□□□□ -1.42
NR1H2P55055 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NR1H2P55055 AC004656.1-201ENST00000568479 4951 ntBASIC6.16□□□□□ -1.42
NR1H2P55055 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NR1H2P55055 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
NR1H2P55055 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.15□□□□□ -1.42
NR1H2P55055 UGT2B24P-201ENST00000514441 1597 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.15□□□□□ -1.42
NR1H2P55055 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 AC062022.1-201ENST00000451026 1684 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NR1H2P55055 LDHAP5-201ENST00000394996 622 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 MTND4LP13-201ENST00000425022 298 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 FAR1P1-201ENST00000427163 934 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 MYL6P3-201ENST00000436904 432 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 Z99127.2-201ENST00000441426 334 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 RPS15AP29-201ENST00000445539 400 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 AL354714.5-201ENST00000450131 590 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 MED28P7-201ENST00000456611 530 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 RPS26P6-201ENST00000475156 348 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 AC015864.1-201ENST00000496512 544 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 MINOS1P4-201ENST00000515470 318 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 AC016550.3-201ENST00000515706 767 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 SCARNA6-201ENST00000515982 265 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.15□□□□□ -1.42
NR1H2P55055 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.15□□□□□ -1.42
NR1H2P55055 AC069240.2-201ENST00000550242 609 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NR1H2P55055 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.15□□□□□ -1.42
NR1H2P55055 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.15□□□□□ -1.42
NR1H2P55055 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.15□□□□□ -1.42
NR1H2P55055 AL133247.2-201ENST00000603236 482 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 AL136370.1-201ENST00000608166 691 ntBASIC6.15□□□□□ -1.42
NR1H2P55055 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.15□□□□□ -1.43
NR1H2P55055 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 MTND4P21-201ENST00000453886 1357 ntBASIC6.15□□□□□ -1.43
NR1H2P55055 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
NR1H2P55055 AC010624.4-201ENST00000597606 1351 ntBASIC6.15□□□□□ -1.43
NR1H2P55055 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.15□□□□□ -1.43
NR1H2P55055 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.15□□□□□ -1.43
NR1H2P55055 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 PROS2P-201ENST00000474651 1951 ntBASIC6.15□□□□□ -1.43
NR1H2P55055 AL359976.1-201ENST00000418655 3528 ntBASIC6.15□□□□□ -1.43
NR1H2P55055 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NR1H2P55055 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
NR1H2P55055 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.14□□□□□ -1.43
NR1H2P55055 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.14□□□□□ -1.43
NR1H2P55055 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NR1H2P55055 AC004023.1-201ENST00000561473 1744 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NR1H2P55055 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 MIR421-201ENST00000365696 85 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.14□□□□□ -1.43
NR1H2P55055 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AC006509.1-201ENST00000420788 634 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 AC002069.1-201ENST00000429649 1159 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 RPEP4-201ENST00000437636 602 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 Z84478.1-201ENST00000438230 1219 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.14□□□□□ -1.43
NR1H2P55055 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 NPM1P9-201ENST00000453156 844 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 RPL31P11-202ENST00000454082 372 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.14□□□□□ -1.43
NR1H2P55055 RN7SL502P-201ENST00000481857 290 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AC090543.1-201ENST00000492168 485 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms