Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.35□□□□□ -1.39
LIMK1P53667 NFYAP1-201ENST00000431953 972 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.35□□□□□ -1.39
LIMK1P53667 NPM1P48-201ENST00000436002 853 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 TUBB4BP6-201ENST00000437576 479 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AL163193.1-201ENST00000444895 788 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 HMGN1P36-201ENST00000446623 298 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 CFL1P4-201ENST00000451536 498 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 PPIAP7-201ENST00000454070 489 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 ACA64.1-201ENST00000459171 127 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AC011476.1-201ENST00000466725 307 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AC021220.1-201ENST00000507445 630 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 IGKV2-19-201ENST00000518132 283 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.35□□□□□ -1.39
LIMK1P53667 AP000620.1-201ENST00000527147 504 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AP003396.4-201ENST00000527574 265 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.35□□□□□ -1.39
LIMK1P53667 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.35□□□□□ -1.39
LIMK1P53667 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.35□□□□□ -1.39
LIMK1P53667 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 AL021707.7-201ENST00000607991 416 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 AC026951.2-201ENST00000613847 241 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 U1.34-201ENST00000618578 162 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 MIR6719-201ENST00000622428 87 ntBASIC6.35□□□□□ -1.39
LIMK1P53667 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIMK1P53667 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.35□□□□□ -1.39
LIMK1P53667 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.35□□□□□ -1.39
LIMK1P53667 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIMK1P53667 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIMK1P53667 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.34□□□□□ -1.39
LIMK1P53667 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
LIMK1P53667 AP003175.1-201ENST00000641383 6658 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 NEK2P4-201ENST00000425793 1329 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LIMK1P53667 AL512310.3-201ENST00000547023 1335 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.34□□□□□ -1.39
LIMK1P53667 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK1P53667 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 AC007068.1-201ENST00000396690 844 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.34□□□□□ -1.39
LIMK1P53667 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC135721.2-201ENST00000464237 300 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 OR5H7P-201ENST00000514084 930 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 RNA5SP340-201ENST00000517132 107 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 OR4A13P-201ENST00000529316 942 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.34□□□□□ -1.39
LIMK1P53667 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.34□□□□□ -1.39
LIMK1P53667 AC135626.1-201ENST00000556983 435 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK1P53667 GTF2IP6-201ENST00000583143 541 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 LSM1P2-201ENST00000604911 322 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 AC211433.2-201ENST00000608433 387 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 AL136295.6-201ENST00000610486 658 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 AC018628.1-201ENST00000624147 3819 ntBASIC6.34□□□□□ -1.39
LIMK1P53667 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.34□□□□□ -1.39
LIMK1P53667 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK1P53667 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.34□□□□□ -1.39
LIMK1P53667 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIMK1P53667 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
LIMK1P53667 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LIMK1P53667 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LIMK1P53667 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
LIMK1P53667 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
LIMK1P53667 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms