Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SYT14P1-202ENST00000600441 1448 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.13□□□□□ -1.43
HNF4AP41235 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HNF4AP41235 AC007842.1-201ENST00000597336 2039 ntBASIC6.13□□□□□ -1.43
HNF4AP41235 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.13□□□□□ -1.43
HNF4AP41235 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
HNF4AP41235 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HNF4AP41235 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HNF4AP41235 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HNF4AP41235 Y_RNA.62-201ENST00000362840 99 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 RN7SKP237-201ENST00000364663 301 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 LCN1P2-201ENST00000372030 223 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 MIR191-201ENST00000384873 92 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HNF4AP41235 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 RPS17P17-201ENST00000419392 409 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 AL691447.1-201ENST00000419456 387 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.12□□□□□ -1.43
HNF4AP41235 KF459542.1-201ENST00000450908 553 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 VPS25P1-201ENST00000455691 508 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 RN7SL643P-201ENST00000471845 291 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 OR9A1P-202ENST00000484361 945 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 RN7SL714P-201ENST00000487050 298 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 AP000926.3-201ENST00000497201 299 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 RN7SL612P-201ENST00000497704 295 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 SNORD116-30-201ENST00000516468 85 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.12□□□□□ -1.43
HNF4AP41235 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 IGHV4-55-201ENST00000520889 368 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 BTG1P1-201ENST00000540396 508 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC090115.2-201ENST00000548060 883 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 AC009729.1-201ENST00000548873 1133 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC025283.1-201ENST00000572039 734 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 RN7SL475P-201ENST00000583379 298 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.12□□□□□ -1.43
HNF4AP41235 AL589765.6-201ENST00000601909 549 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC015660.5-201ENST00000623238 564 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 AP000432.2-201ENST00000624164 2048 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC099654.15-201ENST00000639802 509 ntBASIC6.12□□□□□ -1.43
HNF4AP41235 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.12□□□□□ -1.43
HNF4AP41235 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HNF4AP41235 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HNF4AP41235 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
HNF4AP41235 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
HNF4AP41235 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HNF4AP41235 AL731532.1-201ENST00000623972 4236 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
HNF4AP41235 HSPD1P8-201ENST00000400121 1658 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.11□□□□□ -1.43
HNF4AP41235 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.11□□□□□ -1.43
HNF4AP41235 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 RNU11-6P-201ENST00000391127 133 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HNF4AP41235 RN7SKP38-201ENST00000410782 309 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 TMA16P2-201ENST00000413187 601 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.11□□□□□ -1.43
HNF4AP41235 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HNF4AP41235 FTLP19-201ENST00000433300 394 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.11□□□□□ -1.43
HNF4AP41235 AC103563.5-201ENST00000455643 364 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.11□□□□□ -1.43
HNF4AP41235 GM2AP2-201ENST00000491764 562 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AC093816.1-201ENST00000515076 913 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 AP002981.1-201ENST00000517692 975 ntBASIC6.11□□□□□ -1.43
HNF4AP41235 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms