Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.75□□□□□ -1.17
COL15A1P39059 SNORA70.20-201ENST00000516848 126 ntBASIC7.75□□□□□ -1.17
COL15A1P39059 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.75□□□□□ -1.17
COL15A1P39059 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.75□□□□□ -1.17
COL15A1P39059 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
COL15A1P39059 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 AL137067.2-201ENST00000621202 131 ntBASIC7.75□□□□□ -1.17
COL15A1P39059 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL15A1P39059 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.75□□□□□ -1.17
COL15A1P39059 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL15A1P39059 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL15A1P39059 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL15A1P39059 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL15A1P39059 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 AC105749.1-201ENST00000631338 2008 ntBASIC7.75□□□□□ -1.17
COL15A1P39059 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL15A1P39059 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.75□□□□□ -1.17
COL15A1P39059 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL15A1P39059 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 MIR375-201ENST00000362103 64 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.74□□□□□ -1.17
COL15A1P39059 TUBB4BP6-201ENST00000437576 479 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.74□□□□□ -1.17
COL15A1P39059 AC016027.4-201ENST00000450866 277 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 YWHAEP1-201ENST00000453697 763 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 RN7SL165P-201ENST00000477476 291 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.74□□□□□ -1.17
COL15A1P39059 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.74□□□□□ -1.17
COL15A1P39059 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
COL15A1P39059 AC091193.1-201ENST00000604640 448 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 AL157762.1-201ENST00000619612 415 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 AL450226.2-201ENST00000622913 439 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 RBPJP7-201ENST00000442803 1447 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 RBPJP5-201ENST00000449433 1447 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 AC024587.1-201ENST00000505925 2157 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 USP9YP3-201ENST00000434481 1766 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 AC011369.2-201ENST00000624423 1567 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 HDAC1P2-201ENST00000453661 1398 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 WDR95P-201ENST00000425638 1542 ntBASIC7.74□□□□□ -1.17
COL15A1P39059 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL15A1P39059 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.74□□□□□ -1.17
COL15A1P39059 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL15A1P39059 Z93929.1-201ENST00000418200 1475 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
COL15A1P39059 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL15A1P39059 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL15A1P39059 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.73□□□□□ -1.17
COL15A1P39059 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.73□□□□□ -1.17
COL15A1P39059 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.73□□□□□ -1.17
COL15A1P39059 AL353626.3-201ENST00000413399 657 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.73□□□□□ -1.17
COL15A1P39059 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.73□□□□□ -1.17
COL15A1P39059 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.73□□□□□ -1.17
COL15A1P39059 PCNAP4-201ENST00000532690 730 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.73□□□□□ -1.17
COL15A1P39059 AC103968.1-201ENST00000557841 573 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 AL356801.1-201ENST00000559320 294 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.73□□□□□ -1.17
COL15A1P39059 AC016180.1-201ENST00000567945 403 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 AP005901.4-201ENST00000577336 569 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.73□□□□□ -1.17
COL15A1P39059 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.73□□□□□ -1.17
COL15A1P39059 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.73□□□□□ -1.17
COL15A1P39059 AC020658.4-201ENST00000613987 684 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL15A1P39059 AC096861.1-201ENST00000616652 240 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 MIR6719-201ENST00000622428 87 ntBASIC7.73□□□□□ -1.17
COL15A1P39059 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL15A1P39059 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
COL15A1P39059 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
COL15A1P39059 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms