Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS2P33552 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CKS2P33552 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 AC130304.1-201ENST00000622942 2385 ntBASIC4.36□□□□□ -1.71
CKS2P33552 TUBBP10-201ENST00000427668 1301 ntBASIC4.36□□□□□ -1.71
CKS2P33552 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CKS2P33552 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS2P33552 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS2P33552 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
CKS2P33552 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS2P33552 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 AC011933.2-201ENST00000578539 2790 ntBASIC4.35□□□□□ -1.71
CKS2P33552 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 AC083843.2-201ENST00000568248 6253 ntBASIC4.35□□□□□ -1.71
CKS2P33552 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CKS2P33552 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 RNU1-49P-201ENST00000363468 159 ntBASIC4.35□□□□□ -1.71
CKS2P33552 RN7SKP81-201ENST00000365603 331 ntBASIC4.35□□□□□ -1.71
CKS2P33552 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS2P33552 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CKS2P33552 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CKS2P33552 RPSAP44-201ENST00000406712 884 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 AL589794.1-201ENST00000424971 390 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AC083862.1-201ENST00000427378 1242 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 VN1R53P-201ENST00000429536 957 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 MED28P3-201ENST00000444288 531 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AL020997.1-201ENST00000446554 349 ntBASIC4.35□□□□□ -1.71
CKS2P33552 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 RN7SL836P-201ENST00000476140 296 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 SNX18P24-201ENST00000505249 671 ntBASIC4.35□□□□□ -1.71
CKS2P33552 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 AC090424.1-201ENST00000535243 736 ntBASIC4.35□□□□□ -1.71
CKS2P33552 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS2P33552 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS2P33552 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS2P33552 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC4.35□□□□□ -1.71
CKS2P33552 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.35□□□□□ -1.71
CKS2P33552 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
CKS2P33552 AC008555.7-201ENST00000605008 583 ntBASIC4.35□□□□□ -1.71
CKS2P33552 AL355974.3-201ENST00000617383 467 ntBASIC4.35□□□□□ -1.71
CKS2P33552 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS2P33552 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS2P33552 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS2P33552 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.34□□□□□ -1.71
CKS2P33552 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CKS2P33552 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS2P33552 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.34□□□□□ -1.71
CKS2P33552 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CKS2P33552 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CKS2P33552 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CKS2P33552 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 SNORA70.6-201ENST00000383934 134 ntBASIC4.34□□□□□ -1.71
CKS2P33552 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CKS2P33552 NPM1P38-201ENST00000403835 865 ntBASIC4.34□□□□□ -1.71
CKS2P33552 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS2P33552 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS2P33552 AC079809.1-201ENST00000415468 276 ntBASIC4.34□□□□□ -1.71
CKS2P33552 NMD3P2-201ENST00000421815 761 ntBASIC4.34□□□□□ -1.71
CKS2P33552 AC009303.1-201ENST00000426307 352 ntBASIC4.34□□□□□ -1.71
CKS2P33552 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.34□□□□□ -1.71
CKS2P33552 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms