Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AC006270.3-201ENST00000605967 1036 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AL513218.1-201ENST00000606527 391 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AL353600.1-201ENST00000608148 251 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AP004247.4-201ENST00000608484 942 ntBASIC6.52□□□□□ -1.37
ATF4P18848 FAM238B-204ENST00000612040 423 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AC008121.2-201ENST00000614647 523 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AC234782.5-201ENST00000617723 324 ntBASIC6.52□□□□□ -1.37
ATF4P18848 AL121785.1-201ENST00000624745 708 ntBASIC6.52□□□□□ -1.37
ATF4P18848 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC6.52□□□□□ -1.37
ATF4P18848 PABPC1P8-201ENST00000452851 2086 ntBASIC6.52□□□□□ -1.37
ATF4P18848 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 AC118282.4-201ENST00000623090 1712 ntBASIC6.52□□□□□ -1.37
ATF4P18848 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 HSPA8P17-201ENST00000427029 1382 ntBASIC6.52□□□□□ -1.37
ATF4P18848 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 AL049842.1-201ENST00000402902 1479 ntBASIC6.52□□□□□ -1.37
ATF4P18848 OLFM5P-201ENST00000411807 1478 ntBASIC6.52□□□□□ -1.37
ATF4P18848 ZNF833P-201ENST00000424938 1494 ntBASIC6.52□□□□□ -1.37
ATF4P18848 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC6.52□□□□□ -1.37
ATF4P18848 AL161891.1-201ENST00000621575 4636 ntBASIC6.52□□□□□ -1.37
ATF4P18848 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATF4P18848 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC6.52□□□□□ -1.37
ATF4P18848 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.52□□□□□ -1.37
ATF4P18848 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ATF4P18848 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 AC073429.2-201ENST00000569694 1444 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.51□□□□□ -1.37
ATF4P18848 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 XRCC6P2-201ENST00000457831 1822 ntBASIC6.51□□□□□ -1.37
ATF4P18848 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATF4P18848 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATF4P18848 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 AL606537.1-201ENST00000607258 2011 ntBASIC6.51□□□□□ -1.37
ATF4P18848 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 SNORA4.1-201ENST00000364263 144 ntBASIC6.51□□□□□ -1.37
ATF4P18848 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 MIR185-201ENST00000385288 82 ntBASIC6.51□□□□□ -1.37
ATF4P18848 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATF4P18848 RNA5SP221-201ENST00000411271 103 ntBASIC6.51□□□□□ -1.37
ATF4P18848 RPL7AP72-201ENST00000417266 768 ntBASIC6.51□□□□□ -1.37
ATF4P18848 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 DUTP4-201ENST00000424782 475 ntBASIC6.51□□□□□ -1.37
ATF4P18848 RPL36P2-201ENST00000426026 315 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 AL513175.1-201ENST00000431492 780 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC6.51□□□□□ -1.37
ATF4P18848 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 MTND6P15-201ENST00000441157 521 ntBASIC6.51□□□□□ -1.37
ATF4P18848 HMGN1P32-201ENST00000441744 256 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL591363.1-201ENST00000450091 483 ntBASIC6.51□□□□□ -1.37
ATF4P18848 RPL23AP35-201ENST00000451906 501 ntBASIC6.51□□□□□ -1.37
ATF4P18848 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 NDUFB11P1-201ENST00000455818 465 ntBASIC6.51□□□□□ -1.37
ATF4P18848 ENPP7P2-201ENST00000462675 943 ntBASIC6.51□□□□□ -1.37
ATF4P18848 RPL5P17-201ENST00000469685 877 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC6.51□□□□□ -1.37
ATF4P18848 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 RN7SL239P-201ENST00000490061 300 ntBASIC6.51□□□□□ -1.37
ATF4P18848 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 RACK1-211ENST00000504726 388 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 AC108073.1-201ENST00000508231 674 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL158819.1-201ENST00000514681 398 ntBASIC6.51□□□□□ -1.37
ATF4P18848 MTCO1P30-201ENST00000515244 580 ntBASIC6.51□□□□□ -1.37
ATF4P18848 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.51□□□□□ -1.37
ATF4P18848 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC6.51□□□□□ -1.37
ATF4P18848 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATF4P18848 OR5AK1P-201ENST00000524837 922 ntBASIC6.51□□□□□ -1.37
ATF4P18848 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.51□□□□□ -1.37
ATF4P18848 BANF2-205ENST00000545418 360 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms