Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 AC022905.1-201ENST00000503430 3048 ntBASIC4.84□□□□□ -1.63
CD28P10747 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CD28P10747 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 AC008627.1-201ENST00000517511 1704 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC006213.6-201ENST00000623722 4179 ntBASIC4.84□□□□□ -1.63
CD28P10747 AL121839.2-201ENST00000565058 6943 ntBASIC4.84□□□□□ -1.63
CD28P10747 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.84□□□□□ -1.63
CD28P10747 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 U3.43-201ENST00000410734 213 ntBASIC4.84□□□□□ -1.63
CD28P10747 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 CDY8P-201ENST00000428380 1279 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 AC073109.1-201ENST00000445066 978 ntBASIC4.84□□□□□ -1.63
CD28P10747 MORF4-201ENST00000447135 971 ntBASIC4.84□□□□□ -1.63
CD28P10747 CDY20P-201ENST00000447528 1279 ntBASIC4.84□□□□□ -1.63
CD28P10747 VN1R38P-201ENST00000450265 887 ntBASIC4.84□□□□□ -1.63
CD28P10747 RANP2-201ENST00000456833 229 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC090958.1-201ENST00000511122 351 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 AC021269.1-201ENST00000526860 705 ntBASIC4.84□□□□□ -1.63
CD28P10747 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.84□□□□□ -1.63
CD28P10747 AP001858.2-201ENST00000536213 601 ntBASIC4.84□□□□□ -1.63
CD28P10747 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.84□□□□□ -1.63
CD28P10747 AC092865.1-201ENST00000544395 1023 ntBASIC4.84□□□□□ -1.63
CD28P10747 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.84□□□□□ -1.63
CD28P10747 AC068305.2-201ENST00000550567 1205 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.84□□□□□ -1.63
CD28P10747 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.84□□□□□ -1.63
CD28P10747 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 AC007956.1-201ENST00000555623 542 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.84□□□□□ -1.63
CD28P10747 AC009120.3-201ENST00000563335 499 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 AC012146.2-201ENST00000576545 416 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 AC100767.2-201ENST00000604840 693 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.84□□□□□ -1.63
CD28P10747 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.84□□□□□ -1.63
CD28P10747 AC245014.3-201ENST00000618589 347 ntBASIC4.84□□□□□ -1.63
CD28P10747 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CD28P10747 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CD28P10747 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD28P10747 PARP4P1-201ENST00000435945 2337 ntBASIC4.84□□□□□ -1.64
CD28P10747 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CD28P10747 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CD28P10747 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD28P10747 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD28P10747 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.84□□□□□ -1.64
CD28P10747 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD28P10747 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD28P10747 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.83□□□□□ -1.64
CD28P10747 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD28P10747 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.83□□□□□ -1.64
CD28P10747 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.83□□□□□ -1.64
CD28P10747 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD28P10747 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.83□□□□□ -1.64
CD28P10747 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CD28P10747 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD28P10747 RNA5SP477-201ENST00000362639 119 ntBASIC4.83□□□□□ -1.64
CD28P10747 RNA5SP478-201ENST00000364657 115 ntBASIC4.83□□□□□ -1.64
CD28P10747 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD28P10747 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.83□□□□□ -1.64
CD28P10747 MTND4LP17-201ENST00000414607 293 ntBASIC4.83□□□□□ -1.64
CD28P10747 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.83□□□□□ -1.64
CD28P10747 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.83□□□□□ -1.64
CD28P10747 RPS7P8-201ENST00000418311 581 ntBASIC4.83□□□□□ -1.64
CD28P10747 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.83□□□□□ -1.64
CD28P10747 AC242426.1-201ENST00000435270 960 ntBASIC4.83□□□□□ -1.64
CD28P10747 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.83□□□□□ -1.64
CD28P10747 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.83□□□□□ -1.64
CD28P10747 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.83□□□□□ -1.64
CD28P10747 RPL17P2-201ENST00000491913 451 ntBASIC4.83□□□□□ -1.64
CD28P10747 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.83□□□□□ -1.64
CD28P10747 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.83□□□□□ -1.64
CD28P10747 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.83□□□□□ -1.64
CD28P10747 OR51A1P-201ENST00000511110 946 ntBASIC4.83□□□□□ -1.64
CD28P10747 AC114781.3-201ENST00000512083 142 ntBASIC4.83□□□□□ -1.64
CD28P10747 MTATP6P1-201ENST00000514057 681 ntBASIC4.83□□□□□ -1.64
CD28P10747 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.83□□□□□ -1.64
CD28P10747 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.83□□□□□ -1.64
CD28P10747 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.83□□□□□ -1.64
CD28P10747 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.83□□□□□ -1.64
CD28P10747 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 784.3 ms