Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 USP9YP3-201ENST00000434481 1766 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FREM3P0C091 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 AC092692.1-201ENST00000623625 2595 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.5□□□□□ -1.53
FREM3P0C091 RN7SKP77-201ENST00000363261 353 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AL031985.1-201ENST00000392713 418 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.5□□□□□ -1.53
FREM3P0C091 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.5□□□□□ -1.53
FREM3P0C091 NDUFA5P11-201ENST00000567995 343 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AP001823.1-201ENST00000604056 1003 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AL137246.2-201ENST00000613439 662 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FREM3P0C091 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
FREM3P0C091 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.5□□□□□ -1.53
FREM3P0C091 AC024651.2-201ENST00000562480 2098 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
FREM3P0C091 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FREM3P0C091 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FREM3P0C091 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FREM3P0C091 TMSB4XP2-201ENST00000335179 210 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 RN7SKP269-201ENST00000365545 319 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 AC015977.1-201ENST00000418887 292 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 BX510359.3-201ENST00000422168 306 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 RPL6P30-201ENST00000443382 862 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 TRIM60P16-201ENST00000444048 694 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 GEMIN2P1-201ENST00000454246 752 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.5□□□□□ -1.53
FREM3P0C091 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.5□□□□□ -1.53
FREM3P0C091 RPSAP37-201ENST00000470913 821 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.5□□□□□ -1.53
FREM3P0C091 LDHAP1-201ENST00000509421 992 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.5□□□□□ -1.53
FREM3P0C091 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.5□□□□□ -1.53
FREM3P0C091 AC108673.3-201ENST00000609183 335 ntBASIC5.5□□□□□ -1.53
FREM3P0C091 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.5□□□□□ -1.53
FREM3P0C091 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.5□□□□□ -1.53
FREM3P0C091 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
FREM3P0C091 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.49□□□□□ -1.53
FREM3P0C091 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FREM3P0C091 AC022164.1-201ENST00000568767 2673 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.49□□□□□ -1.53
FREM3P0C091 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
FREM3P0C091 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.49□□□□□ -1.53
FREM3P0C091 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FREM3P0C091 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.49□□□□□ -1.53
FREM3P0C091 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FREM3P0C091 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.49□□□□□ -1.53
FREM3P0C091 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.49□□□□□ -1.53
FREM3P0C091 VN1R3-201ENST00000418822 919 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 IPPKP1-201ENST00000422501 768 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.49□□□□□ -1.53
FREM3P0C091 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 RPS12P17-201ENST00000438591 377 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 RN7SL284P-201ENST00000498823 275 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 AC090958.1-201ENST00000511122 351 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.49□□□□□ -1.53
FREM3P0C091 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.49□□□□□ -1.53
FREM3P0C091 AC006530.1-201ENST00000555980 571 ntBASIC5.49□□□□□ -1.53
FREM3P0C091 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.49□□□□□ -1.53
FREM3P0C091 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.49□□□□□ -1.53
FREM3P0C091 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.49□□□□□ -1.53
FREM3P0C091 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
FREM3P0C091 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FREM3P0C091 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.49□□□□□ -1.53
FREM3P0C091 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
FREM3P0C091 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms