Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OR13C1P-202ENST00000641378 2919 ntBASIC6.66□□□□□ -1.34
RB1P06400 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.66□□□□□ -1.34
RB1P06400 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 AL132875.1-201ENST00000403623 949 ntBASIC6.66□□□□□ -1.34
RB1P06400 AL023284.3-201ENST00000407767 334 ntBASIC6.66□□□□□ -1.34
RB1P06400 U3.43-201ENST00000410734 213 ntBASIC6.66□□□□□ -1.34
RB1P06400 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.66□□□□□ -1.34
RB1P06400 RANP7-201ENST00000418085 644 ntBASIC6.66□□□□□ -1.34
RB1P06400 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 AC245884.2-201ENST00000426257 404 ntBASIC6.66□□□□□ -1.34
RB1P06400 UBE2V2P1-201ENST00000434717 398 ntBASIC6.66□□□□□ -1.34
RB1P06400 NPM1P48-201ENST00000436002 853 ntBASIC6.66□□□□□ -1.34
RB1P06400 AC064862.4-201ENST00000442180 334 ntBASIC6.66□□□□□ -1.34
RB1P06400 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.66□□□□□ -1.34
RB1P06400 AL139156.3-201ENST00000454802 394 ntBASIC6.66□□□□□ -1.34
RB1P06400 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 AC110749.1-201ENST00000462007 357 ntBASIC6.66□□□□□ -1.34
RB1P06400 RPSAP37-201ENST00000470913 821 ntBASIC6.66□□□□□ -1.34
RB1P06400 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.66□□□□□ -1.34
RB1P06400 ATP5LP3-201ENST00000514223 304 ntBASIC6.66□□□□□ -1.34
RB1P06400 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 AC112191.2-201ENST00000522428 333 ntBASIC6.66□□□□□ -1.34
RB1P06400 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.66□□□□□ -1.34
RB1P06400 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.66□□□□□ -1.34
RB1P06400 AC234775.3-201ENST00000564612 656 ntBASIC6.66□□□□□ -1.34
RB1P06400 COX6CP7-201ENST00000597056 208 ntBASIC6.66□□□□□ -1.34
RB1P06400 AC010615.3-201ENST00000597319 394 ntBASIC6.66□□□□□ -1.34
RB1P06400 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.66□□□□□ -1.34
RB1P06400 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 AL513218.1-201ENST00000606527 391 ntBASIC6.66□□□□□ -1.34
RB1P06400 RN7SL787P-201ENST00000613000 284 ntBASIC6.66□□□□□ -1.34
RB1P06400 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.66□□□□□ -1.34
RB1P06400 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RB1P06400 AC022819.1-201ENST00000563495 3910 ntBASIC6.66□□□□□ -1.34
RB1P06400 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RB1P06400 AC010624.4-201ENST00000597606 1351 ntBASIC6.66□□□□□ -1.34
RB1P06400 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RB1P06400 AC106872.5-201ENST00000508856 1416 ntBASIC6.66□□□□□ -1.34
RB1P06400 Z93929.1-201ENST00000418200 1475 ntBASIC6.66□□□□□ -1.34
RB1P06400 AF287957.1-201ENST00000607368 1595 ntBASIC6.65□□□□□ -1.34
RB1P06400 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.65□□□□□ -1.34
RB1P06400 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
RB1P06400 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
RB1P06400 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 RNA5SP350-201ENST00000363298 111 ntBASIC6.65□□□□□ -1.34
RB1P06400 RNU1-24P-201ENST00000364285 165 ntBASIC6.65□□□□□ -1.34
RB1P06400 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 CLUHP1-201ENST00000435012 1190 ntBASIC6.65□□□□□ -1.34
RB1P06400 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 RPL36AP39-201ENST00000445859 318 ntBASIC6.65□□□□□ -1.34
RB1P06400 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.65□□□□□ -1.34
RB1P06400 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.65□□□□□ -1.34
RB1P06400 UBFD1P1-201ENST00000473259 814 ntBASIC6.65□□□□□ -1.34
RB1P06400 AC106800.2-201ENST00000514009 1103 ntBASIC6.65□□□□□ -1.34
RB1P06400 SETP21-201ENST00000514799 892 ntBASIC6.65□□□□□ -1.34
RB1P06400 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 GTF2IP11-201ENST00000526931 420 ntBASIC6.65□□□□□ -1.34
RB1P06400 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.65□□□□□ -1.34
RB1P06400 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.65□□□□□ -1.34
RB1P06400 AC013731.1-201ENST00000604340 883 ntBASIC6.65□□□□□ -1.34
RB1P06400 AL591167.1-201ENST00000607321 456 ntBASIC6.65□□□□□ -1.34
RB1P06400 AC004477.3-201ENST00000614061 590 ntBASIC6.65□□□□□ -1.34
RB1P06400 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RB1P06400 AL136228.1-201ENST00000622221 319 ntBASIC6.65□□□□□ -1.34
RB1P06400 AL132640.3-201ENST00000630473 177 ntBASIC6.65□□□□□ -1.34
RB1P06400 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RB1P06400 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RB1P06400 RAD17P2-201ENST00000451754 1977 ntBASIC6.65□□□□□ -1.34
RB1P06400 NEK2P4-201ENST00000425793 1329 ntBASIC6.65□□□□□ -1.35
RB1P06400 AL512310.3-201ENST00000547023 1335 ntBASIC6.65□□□□□ -1.35
RB1P06400 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RB1P06400 AC024651.2-201ENST00000562480 2098 ntBASIC6.65□□□□□ -1.35
RB1P06400 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
RB1P06400 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.65□□□□□ -1.35
RB1P06400 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
RB1P06400 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RB1P06400 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RB1P06400 AC090220.1-201ENST00000593078 1699 ntBASIC6.65□□□□□ -1.35
RB1P06400 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RB1P06400 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RB1P06400 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RB1P06400 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.64□□□□□ -1.35
RB1P06400 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms