Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC068491.1-201ENST00000449539 1241 ntBASIC6.46□□□□□ -1.38
APOEP02649 OR52I1-201ENST00000450052 1050 ntBASIC6.46□□□□□ -1.38
APOEP02649 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 RN7SL221P-201ENST00000466190 281 ntBASIC6.46□□□□□ -1.38
APOEP02649 RPL34P33-201ENST00000486062 334 ntBASIC6.46□□□□□ -1.38
APOEP02649 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 AC036111.2-201ENST00000533247 901 ntBASIC6.46□□□□□ -1.38
APOEP02649 RPA2P3-201ENST00000533268 770 ntBASIC6.46□□□□□ -1.38
APOEP02649 OR4A40P-201ENST00000533878 948 ntBASIC6.46□□□□□ -1.38
APOEP02649 AC084121.1-201ENST00000533882 835 ntBASIC6.46□□□□□ -1.38
APOEP02649 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 AC092865.1-201ENST00000544395 1023 ntBASIC6.46□□□□□ -1.38
APOEP02649 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 AL845552.1-201ENST00000556820 323 ntBASIC6.46□□□□□ -1.38
APOEP02649 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 AC002310.3-201ENST00000569728 723 ntBASIC6.46□□□□□ -1.38
APOEP02649 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.46□□□□□ -1.38
APOEP02649 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.46□□□□□ -1.38
APOEP02649 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
APOEP02649 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
APOEP02649 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
APOEP02649 AC027575.3-201ENST00000583058 2747 ntBASIC6.46□□□□□ -1.38
APOEP02649 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
APOEP02649 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
APOEP02649 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
APOEP02649 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.45□□□□□ -1.38
APOEP02649 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.45□□□□□ -1.38
APOEP02649 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
APOEP02649 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
APOEP02649 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
APOEP02649 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 SNORA43.1-201ENST00000364863 140 ntBASIC6.45□□□□□ -1.38
APOEP02649 SNORA70.9-201ENST00000384370 135 ntBASIC6.45□□□□□ -1.38
APOEP02649 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.45□□□□□ -1.38
APOEP02649 VN1R12P-201ENST00000403778 876 ntBASIC6.45□□□□□ -1.38
APOEP02649 AL354707.3-201ENST00000427308 331 ntBASIC6.45□□□□□ -1.38
APOEP02649 RPSAP65-201ENST00000429660 595 ntBASIC6.45□□□□□ -1.38
APOEP02649 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.45□□□□□ -1.38
APOEP02649 RPSAP40-201ENST00000442343 891 ntBASIC6.45□□□□□ -1.38
APOEP02649 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.45□□□□□ -1.38
APOEP02649 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.45□□□□□ -1.38
APOEP02649 HSD3BP3-201ENST00000514706 994 ntBASIC6.45□□□□□ -1.38
APOEP02649 RNA5SP473-201ENST00000516402 125 ntBASIC6.45□□□□□ -1.38
APOEP02649 Vault.2-201ENST00000516519 98 ntBASIC6.45□□□□□ -1.38
APOEP02649 AC011853.1-201ENST00000518911 454 ntBASIC6.45□□□□□ -1.38
APOEP02649 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.45□□□□□ -1.38
APOEP02649 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.45□□□□□ -1.38
APOEP02649 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.45□□□□□ -1.38
APOEP02649 AC026826.3-201ENST00000561747 158 ntBASIC6.45□□□□□ -1.38
APOEP02649 MRPS21P8-201ENST00000569196 235 ntBASIC6.45□□□□□ -1.38
APOEP02649 MIR4271-201ENST00000582451 67 ntBASIC6.45□□□□□ -1.38
APOEP02649 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.45□□□□□ -1.38
APOEP02649 AC027229.1-201ENST00000583887 253 ntBASIC6.45□□□□□ -1.38
APOEP02649 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.45□□□□□ -1.38
APOEP02649 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.45□□□□□ -1.38
APOEP02649 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.45□□□□□ -1.38
APOEP02649 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.45□□□□□ -1.38
APOEP02649 AL591167.1-201ENST00000607321 456 ntBASIC6.45□□□□□ -1.38
APOEP02649 AC073389.3-201ENST00000609434 935 ntBASIC6.45□□□□□ -1.38
APOEP02649 AC092681.3-201ENST00000609463 678 ntBASIC6.45□□□□□ -1.38
APOEP02649 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.45□□□□□ -1.38
APOEP02649 AC022106.1-201ENST00000612834 766 ntBASIC6.45□□□□□ -1.38
APOEP02649 AL080312.2-201ENST00000613001 630 ntBASIC6.45□□□□□ -1.38
APOEP02649 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.45□□□□□ -1.38
APOEP02649 FAM27E2-201ENST00000619668 403 ntBASIC6.45□□□□□ -1.38
APOEP02649 AC073593.1-201ENST00000624500 411 ntBASIC6.45□□□□□ -1.38
APOEP02649 AL162377.2-201ENST00000624532 337 ntBASIC6.45□□□□□ -1.38
APOEP02649 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.45□□□□□ -1.38
APOEP02649 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.45□□□□□ -1.38
APOEP02649 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.45□□□□□ -1.38
APOEP02649 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
APOEP02649 AOX3P-204ENST00000491025 2107 ntBASIC6.44□□□□□ -1.38
APOEP02649 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
APOEP02649 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.44□□□□□ -1.38
APOEP02649 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.44□□□□□ -1.38
APOEP02649 RNA5SP156-201ENST00000410250 110 ntBASIC6.44□□□□□ -1.38
APOEP02649 RN7SKP108-201ENST00000411367 328 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms