Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DQA1P01909 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AL137058.3-201ENST00000624531 3099 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 U3.7-201ENST00000363668 216 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 SNORA77.2-201ENST00000408571 112 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RNA5SP431-201ENST00000410312 120 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC024937.2-201ENST00000411669 1242 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC245096.1-201ENST00000413104 546 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PPIAP23-201ENST00000420099 497 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AL138479.1-201ENST00000426913 484 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AL592114.2-201ENST00000440142 532 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AL158214.1-201ENST00000444423 404 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RBMY2AP-201ENST00000445405 1157 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RBMY2CP-201ENST00000448575 1157 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RBMY2DP-202ENST00000448881 1157 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RBMY2EP-202ENST00000456360 940 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC073594.1-201ENST00000462065 364 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RN7SL390P-201ENST00000470634 284 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC073648.3-201ENST00000504939 925 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RNA5SP75-201ENST00000516841 111 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 RBMS2P1-201ENST00000525031 1226 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PPIAP6-201ENST00000557078 499 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC010287.1-201ENST00000566916 357 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC091932.1-201ENST00000569381 427 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 FCGR1CP-201ENST00000579737 1127 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC092944.2-201ENST00000605443 889 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC244517.3-201ENST00000616254 1235 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AC022400.9-201ENST00000623633 273 ntBASIC4.56□□□□□ -1.68
HLA-DQA1P01909 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DQA1P01909 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 MAPK10-338ENST00000641647 3362 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 SNORD16-201ENST00000362803 99 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 RN7SKP189-201ENST00000365042 330 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 AL139100.1-201ENST00000408001 498 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 SETP22-201ENST00000412243 957 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 NMD3P2-201ENST00000421815 761 ntBASIC4.55□□□□□ -1.68
HLA-DQA1P01909 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQA1P01909 RPS7P4-201ENST00000444127 582 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms