Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AL049829.1-201ENST00000465411 156 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 NPM1P21-201ENST00000513394 762 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 MRPS5P3-201ENST00000515577 166 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC090115.2-201ENST00000548060 883 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 DYNLL1P1-201ENST00000595442 269 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC011891.2-201ENST00000604949 397 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AL122023.1-201ENST00000622847 530 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC007603.3-201ENST00000636915 979 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC107980.1-201ENST00000558671 3355 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC096921.2-201ENST00000561507 1916 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AL033543.1-201ENST00000623440 13454 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NKX2-2O95096 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
NKX2-2O95096 RN7SKP237-201ENST00000364663 301 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AMZ2P2-201ENST00000406819 1057 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC016908.1-201ENST00000442571 1219 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AC079922.1-201ENST00000443291 359 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 CXCR2P1-202ENST00000443392 1074 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AL022319.1-201ENST00000458183 1167 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AC105918.1-201ENST00000474399 838 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-2O95096 RNA5SP206-201ENST00000516703 121 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 RNU6-467P-201ENST00000517027 110 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AP001858.2-201ENST00000536213 601 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-2O95096 AC012368.3-201ENST00000604190 219 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 RPL21P136-201ENST00000605378 396 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX2-2O95096 MIR6823-201ENST00000622118 61 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AC003992.1-201ENST00000635364 557 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AC116667.2-201ENST00000641075 823 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 AL359976.1-201ENST00000418655 3528 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NKX2-2O95096 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-2O95096 HDAC1P2-201ENST00000453661 1398 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AP001541.1-201ENST00000623322 1904 ntBASIC5.8□□□□□ -1.48
NKX2-2O95096 AC112255.1-201ENST00000624070 2493 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms