Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC188H7C350 BX276092.8-201ENST00000455722 250 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 AL133480.2-201ENST00000456723 487 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 SEPT14P1-201ENST00000458703 648 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 AC079080.1-201ENST00000479841 822 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 AL133372.1-201ENST00000493565 745 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 RN7SKP288-201ENST00000516227 268 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC188H7C350 OR5D2P-201ENST00000524390 911 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 CASP1P2-201ENST00000526830 1258 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC188H7C350 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCDC188H7C350 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC188H7C350 AC026898.1-201ENST00000586404 571 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC188H7C350 RNA5SP439-201ENST00000617595 124 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 AL121985.3-201ENST00000620690 523 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC188H7C350 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC188H7C350 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC188H7C350 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC188H7C350 AC079776.5-201ENST00000641920 211 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCDC188H7C350 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 CASC19-260ENST00000641828 2001 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 AC130304.1-201ENST00000622942 2385 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCDC188H7C350 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCDC188H7C350 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC188H7C350 AL132656.3-201ENST00000606384 1595 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CCDC188H7C350 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC188H7C350 SAMM50P1-201ENST00000455403 1399 ntBASIC6.31□□□□□ -1.4
CCDC188H7C350 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC004076.2-201ENST00000620532 3323 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CCDC188H7C350 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC005261.2-201ENST00000593427 4258 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 AL133243.2-201ENST00000610331 1621 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC188H7C350 RPL5P2-201ENST00000429598 854 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 GTF3AP6-201ENST00000432585 986 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AC112492.2-201ENST00000432774 1030 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AL512593.1-201ENST00000444758 779 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 ACA64.4-201ENST00000459070 127 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 RN7SL350P-201ENST00000492591 299 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 OR8Q1P-201ENST00000526467 655 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AC130366.1-201ENST00000526505 1192 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CCDC188H7C350 OR4C49P-201ENST00000563891 900 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AC007346.2-201ENST00000564816 892 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC107993.1-201ENST00000591343 684 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AL713998.2-201ENST00000604538 1198 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC188H7C350 AC117503.3-201ENST00000623811 601 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 SNX18P12-201ENST00000624821 759 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 NLRP3P1-201ENST00000622303 1785 ntBASIC6.3□□□□□ -1.4
CCDC188H7C350 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
CCDC188H7C350 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC188H7C350 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC188H7C350 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CCDC188H7C350 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC188H7C350 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC188H7C350 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC188H7C350 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC188H7C350 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms