Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GTF3AP5-201ENST00000442645 697 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC008069.1-201ENST00000444710 950 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC245028.2-201ENST00000458673 253 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SL337P-201ENST00000462468 301 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC090589.1-201ENST00000473109 362 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC008410.1-201ENST00000483777 339 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 SCG5-207ENST00000497208 949 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC090638.1-201ENST00000498296 909 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC131392.1-201ENST00000506490 633 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SL208P-201ENST00000577964 296 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SL155P-201ENST00000581538 263 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 MIR4642-201ENST00000583943 82 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SL435P-201ENST00000584418 282 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL035410.2-201ENST00000604963 864 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL109936.2-201ENST00000605350 650 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC006328.2-201ENST00000623198 397 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC012005.2-201ENST00000624333 397 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AC093775.1-201ENST00000624154 1868 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AL359091.1-201ENST00000449048 1734 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 OR14L1P-202ENST00000641545 3009 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 MIPEPP2-201ENST00000422560 1819 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 AP001541.1-201ENST00000623322 1904 ntBASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CHKB-CPT1BH3BT56 DDX18P3-201ENST00000404856 2007 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC106872.6-201ENST00000514228 1346 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL133243.3-201ENST00000617415 3004 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 EEF1A1P15-201ENST00000395772 1408 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 PSG10P-201ENST00000501199 1500 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 RN7SKP75-201ENST00000363070 296 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 SNORA70.3-201ENST00000365075 132 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 RNA5SP474-201ENST00000391234 90 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 RPL7AP72-201ENST00000417266 768 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC004690.1-201ENST00000418216 328 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL353779.2-201ENST00000424917 308 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC018804.1-201ENST00000430381 618 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL359265.1-201ENST00000440296 795 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 CYCSP44-201ENST00000448560 313 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL162739.1-201ENST00000450606 307 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 RSU1P1-201ENST00000453416 441 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 RPS27AP3-201ENST00000453803 454 ntBASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHKB-CPT1BH3BT56 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms