Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 LINC02019-201ENST00000608605 2060 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP114-201ENST00000363780 113 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 ANXA2P2-201ENST00000435128 1020 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 RPL23AP60-201ENST00000450011 454 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 GAPDHP14-201ENST00000450472 937 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC005517.1-201ENST00000452091 489 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 RPL12P39-201ENST00000455456 496 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 NDUFB4P1-201ENST00000462398 381 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 RPL23AP40-201ENST00000487630 390 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC073648.3-201ENST00000504939 925 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 IGKV1D-32-201ENST00000517449 318 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 BCAS2P1-201ENST00000528022 632 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 OR4C1P-201ENST00000530880 937 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AC091133.5-201ENST00000603088 301 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 Z93930.3-201ENST00000607919 749 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 SNX18P12-201ENST00000624821 759 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBFOX3A6NFN3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 QRSL1P3-201ENST00000552666 1316 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 RN7SKP257-201ENST00000364525 309 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC074375.1-201ENST00000372993 192 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 RNA5SP431-201ENST00000410312 120 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 GPS2P1-201ENST00000411761 986 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 PTCD2P2-201ENST00000415579 1095 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC092646.1-201ENST00000427142 901 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC013410.1-201ENST00000436223 1232 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 RPS10P18-201ENST00000442662 495 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 RPL7AP71-201ENST00000451120 739 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 FRG2FP-204ENST00000453982 852 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC005017.1-201ENST00000482002 490 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC106760.2-201ENST00000504159 619 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 ASNSP4-201ENST00000511103 447 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 RN7SKP288-201ENST00000516227 268 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC078899.1-201ENST00000521432 1185 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC021820.1-201ENST00000525564 808 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC126615.2-201ENST00000553003 515 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC116158.1-201ENST00000560231 2129 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 FRG2IP-201ENST00000563581 781 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AC007346.2-201ENST00000564816 892 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 AL163952.1-202ENST00000569625 600 ntBASIC4.77□□□□□ -1.65
RBFOX3A6NFN3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms